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anamox1_curated_scaffold_1509

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1509_1
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..463)
DNA (462bp) protein (154aa)
hypothetical protein Tax=zeta proteobacterium SCGC AB-604-B04 RepID=UPI000370C6D0
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
anamox1_curated_scaffold_1509_2
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(460..1377)
DNA (918bp) protein (306aa)
Protoheme IX farnesyltransferase 2 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=COXX2_MAGSA
polyprenyltransferase
Tax=RBG_16_Betaproteobacteria_66_20_curated
anamox1_curated_scaffold_1509_3
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1385..3109)
DNA (1725bp) protein (575aa)
Cytochrome c oxidase (B(O/a)3-type) chain I Tax=Thalassobacter arenae DSM 19593 RepID=S9RTA5_9RHOB
Heme/copper-type cytochrome/quinol oxidase, subunit 1
Tax=RBG_16_Gamma2_60_9_curated
anamox1_curated_scaffold_1509_4
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3134..3670)
DNA (537bp) protein (179aa)
Cytochrome c oxidase subunit II Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RV14_ACCPU
cytochrome c oxidase subunit II
Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
anamox1_curated_scaffold_1509_5
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3723..3878)
DNA (156bp) protein (52aa)
Uncharacterized protein Tax=Thalassobacter arenae DSM 19593 RepID=S9QB36_9RHOB
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
anamox1_curated_scaffold_1509_6

Not on your lists

comp(4035..4574)
DNA (540bp) protein (180aa)
ADP-ribose pyrophosphatase Tax=mine drainage metagenome RepID=T1AZW7_9ZZZZ
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:EQD61908.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
ADP-ribose pyrophosphatase
anamox1_curated_scaffold_1509_trna_1
unknown

Not on your lists

comp(4595..4678)
DNA (84bp)
transferRNA Leu
anamox1_curated_scaffold_1509_7
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4769..5827
DNA (1059bp) protein (353aa)
hypothetical protein Tax=Arhodomonas aquaeolei RepID=UPI000364ED75
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase
Tax=RBG_16_Gamma2_65_34_curated
anamox1_curated_scaffold_1509_8
Marichromatium purpuratum, Marichromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5824..6960
DNA (1137bp) protein (379aa)
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Marichromatium.;" source="Marichromatium purpuratum 984.;"
Queuine tRNA-ribosyltransferase Tax=Marichromatium purpuratum 984 RepID=F9TX57_MARPU
anamox1_curated_scaffold_1509_9

Not on your lists

7022..7354
DNA (333bp) protein (111aa)
YajC Tax=mine drainage metagenome RepID=T1CBM8_9ZZZZ
YajC {ECO:0000313|EMBL:EQD78728.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
yajC; preprotein translocase subunit YajC
anamox1_curated_scaffold_1509_10
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7363..9231
DNA (1869bp) protein (623aa)
Protein translocase subunit SecD Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G2T9_9GAMM
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
secD; preprotein translocase subunit SecD
anamox1_curated_scaffold_1509_11
Solemya velum gill symbiont, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9254..10189
DNA (936bp) protein (312aa)
Protein-export membrane protein SecF Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GTQ1_THISH
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="Solemya velum gill symbiont.;"
secF; preprotein translocase subunit SecF
anamox1_curated_scaffold_1509_12
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10214..10960
DNA (747bp) protein (249aa)
Excinuclease ABC subunit C Tax=Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5) RepID=K0CG06_ALCDB
UPF0053 protein
Tax=RBG_16_Gamma2_60_9_curated
anamox1_curated_scaffold_1509_13
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10976..11776)
DNA (801bp) protein (267aa)
Inositol monophosphatase Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BWC8_NITHN
inositol monophosphatase
Inositol monophosphatase {ECO:0000313|EMBL:ADE13778.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
anamox1_curated_scaffold_1509_14
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11851..12672
DNA (822bp) protein (274aa)
tRNA/rTrmH family RNA methyltransferase Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G6V3_9GAMM
RNA methyltransferase
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
anamox1_curated_scaffold_1509_15
Pantoea anthophila, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12669..14249
DNA (1581bp) protein (527aa)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00038344}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea anthophila.;"
yfhO; L-cysteine desulfurase (EC:2.8.1.7)
cysteine desulfurase Tax=Nevskia ramosa RepID=UPI0003B5D949
anamox1_curated_scaffold_1509_16

Not on your lists

14259..14582
DNA (324bp) protein (108aa)
ISC system FeS cluster assembly protein Tax=mine drainage metagenome RepID=T1AH14_9ZZZZ
ISC system FeS cluster assembly protein {ECO:0000313|EMBL:EQD59796.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
iron-sulfur cluster assembly protein
anamox1_curated_scaffold_1509_17
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14736..15164
DNA (429bp) protein (143aa)
ndk; nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=NDK_METCA
Tax=RBG_16_Gamma2_64_11_curated
anamox1_curated_scaffold_1509_18
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15169..16338
DNA (1170bp) protein (390aa)
Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
Dual-specificity RNA methyltransferase RlmN Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BZ51_NITHN
radical SAM protein
anamox1_curated_scaffold_1509_19
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16335..17093
DNA (759bp) protein (253aa)
Uncharacterized protein Tax=Hydrocarboniphaga effusa AP103 RepID=I8T8P1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIT70325.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
TPR repeat containing protein
anamox1_curated_scaffold_1509_20
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17101..17961
DNA (861bp) protein (287aa)
hypothetical protein Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036F69BB
transmembrane protein
Tax=RBG_16_Gamma2_65_34_curated
anamox1_curated_scaffold_1509_21
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


17988..18878
DNA (891bp) protein (297aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
Histidine--tRNA ligase Tax=Thiothrix nivea DSM 5205 RepID=I3BQ22_9GAMM
histidyl-tRNA synthase
Displaying 22 items

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