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anamox1_curated_scaffold_1041

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1041_1
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(6..521)
DNA (516bp) protein (172aa)
Transcriptional regulator, LysR family Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZS49_OPITP
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACB74725.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
anamox1_curated_scaffold_1041_2
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

935..1306
DNA (372bp) protein (124aa)
Uncharacterised protein {ECO:0000313|EMBL:CRH67660.1}; species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
anamox1_curated_scaffold_1041_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(1733..2125)
DNA (393bp) protein (131aa)
Microcompartments protein Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QU85_CHLT3
Carbon dioxide concentrating mechanism/carboxysome shell protein {ECO:0000313|EMBL:CDM66490.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
microcompartments protein
anamox1_curated_scaffold_1041_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

2325..3350
DNA (1026bp) protein (342aa)
Putative uncharacterized protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEL2_CHLTF
Helix-turn-helix domain {ECO:0000313|EMBL:CDM66491.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
anamox1_curated_scaffold_1041_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

3429..4898
DNA (1470bp) protein (490aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LE20_CHLTF
anamox1_curated_scaffold_1041_6
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5031..7091
DNA (2061bp) protein (687aa)
bacterial leucyl aminopeptidase (EC:3.4.11.10)
Bacterial leucyl aminopeptidase Tax=Cystobacter fuscus DSM 2262 RepID=S9R7I2_9DELT
Bacterial leucyl aminopeptidase {ECO:0000313|EMBL:EPX65008.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
anamox1_curated_scaffold_1041_7
unknown

Not on your lists

7329..7469
DNA (141bp) protein (47aa)

This feature has no annotations

anamox1_curated_scaffold_1041_8
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7727..8161
DNA (435bp) protein (145aa)
Uncharacterized protein Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EF86_RUNSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI48963.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
anamox1_curated_scaffold_1041_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(8642..10540)
DNA (1899bp) protein (633aa)
ATPase componens of ABC transporters with duplicated ATPase domains Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFY6_CHLTF
ATPase component of ABC transporters with duplicated ATPase domain {ECO:0000313|EMBL:CDM65004.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ABC transporter ATPase
anamox1_curated_scaffold_1041_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(10609..11859)
DNA (1251bp) protein (417aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
PPIC-type PPIASE domain, SurA N-terminal domain-containing protein (EC:5.2.1.8)
PPIC-type PPIASE domain, SurA N-terminal domain protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGD2_CHLTF
anamox1_curated_scaffold_1041_11
Desulfomicrobium baculatum, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11950..12144
DNA (195bp) protein (65aa)
50S ribosomal protein L28 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LSI8_DESBD
50S ribosomal protein L28
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfomicrobiaceae; Desulfomicrobium.;" source="Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378); (Desulfovibrio baculatus).;"
anamox1_curated_scaffold_1041_12
[Clostridium] cellulolyticum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12212..12592)
DNA (381bp) protein (127aa)
Endoribonuclease L-PSP Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I6S9_CLOCE
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ACL76921.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 /; H10).;"
anamox1_curated_scaffold_1041_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(12686..14890)
DNA (2205bp) protein (735aa)
(P)ppGpp synthetase, RelA/SpoT family {ECO:0000313|EMBL:CDM65000.1}; EC=2.7.6.5 {ECO:0000313|EMBL:CDM65000.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
(p)ppGpp synthetase RelA/SpoT family (EC:2.7.6.5)
(P)ppGpp synthetase, RelA/SpoT family Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFF4_CHLTF
anamox1_curated_scaffold_1041_14
unknown

Not on your lists

comp(14977..16032)
DNA (1056bp) protein (352aa)

This feature has no annotations

anamox1_curated_scaffold_1041_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(16111..16584)
DNA (474bp) protein (158aa)
Biopolymer transport protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGE5_CHLTF
Biopolymer transport protein {ECO:0000313|EMBL:CDM64998.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
biopolymer transport protein
anamox1_curated_scaffold_1041_16
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(16631..17077)
DNA (447bp) protein (149aa)
Biopolymer transport protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGE4_CHLTF
Biopolymer transport protein {ECO:0000313|EMBL:CDM64997.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
biopolymer transport protein
anamox1_curated_scaffold_1041_17
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(17128..17877)
DNA (750bp) protein (250aa)
Outer membrane transport energization protein ExbB Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGE3_CHLTF
Outer membrane transport energization protein ExbB (TC 2.C.1.1.1) {ECO:0000313|EMBL:CDM64996.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
outer membrane transport energization protein ExbB
anamox1_curated_scaffold_1041_18
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(18003..18824)
DNA (822bp) protein (274aa)
TonB family C-terminal domain protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGE2_CHLTF
TonB family protein {ECO:0000313|EMBL:CDM64995.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
TonB family C-terminal domain-containing protein
anamox1_curated_scaffold_1041_19
unknown

Not on your lists

18915..19016
DNA (102bp) protein (34aa)

This feature has no annotations

anamox1_curated_scaffold_1041_20
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(19190..20272)
DNA (1083bp) protein (361aa)
Protein-export membrane protein SecF Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NU42_GRAMM
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
protein-export membrane protein SecF
anamox1_curated_scaffold_1041_21
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(20301..21977)
DNA (1677bp) protein (559aa)
Protein translocase subunit SecD Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGE0_CHLTF
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
protein-export membrane protein SecD
anamox1_curated_scaffold_1041_22
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(22005..22304)
DNA (300bp) protein (100aa)
Preprotein translocase, YajC subunit Tax=Barnesiella intestinihominis YIT 11860 RepID=K0X2V9_9PORP
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:CDM66288.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
membrane protein
anamox1_curated_scaffold_1041_23
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(22360..23541)
DNA (1182bp) protein (394aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Queuine tRNA-ribosyltransferase Tax=Geobacter metallireducens RepID=Q39XD0_GEOMG
tgt-2; queuine tRNA-ribosyltransferase
anamox1_curated_scaffold_1041_24
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(23538..25016)
DNA (1479bp) protein (493aa)
DoxX family protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TQA1_9CHLR
DoxX family protein {ECO:0000313|EMBL:EFH85749.1}; Flags: Precursor;; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
doxX; DoxX protein
anamox1_curated_scaffold_1041_25
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(25038..25610)
DNA (573bp) protein (191aa)
GTPase Der Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHC8_CHLTF
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ribosome-associated GTPase EngA
Displaying 25 items

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