ggKbase home page

anamox1_curated_scaffold_1323

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1323_1
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(1..774)
DNA (774bp) protein (258aa)
Pseudouridine-5'-phosphate glycosidase {ECO:0000256|HAMAP-Rule:MF_01876}; Short=PsiMP glycosidase {ECO:0000256|HAMAP-Rule:MF_01876};; EC=4.2.1.70 {ECO:0000256|HAMAP-Rule:MF_01876};; species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
pseudouridine-5''''-phosphate glycosidase Tax=Spirochaeta bajacaliforniensis RepID=UPI00037C247B
indigoidine synthase A family protein
anamox1_curated_scaffold_1323_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(781..1380)
DNA (600bp) protein (200aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
signal peptidase I type (EC:3.4.21.89)
Signal peptidase I, bacterial type Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LG16_CHLTF
anamox1_curated_scaffold_1323_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(1565..2308)
DNA (744bp) protein (248aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ribonuclease III Tax=Streptomyces sp. SS RepID=UPI0002E9832E
ribonuclease III
anamox1_curated_scaffold_1323_4
Pseudomonas sp. FH4, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2372..3649)
DNA (1278bp) protein (426aa)
transcriptional regulator
Alginate regulatory protein AlgP {ECO:0000313|EMBL:ETK21323.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. FH4.;"
anamox1_curated_scaffold_1323_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(3909..5564)
DNA (1656bp) protein (552aa)
Cell division protein FtsI/penicillin-binding protein 2 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LH80_CHLTF
Cell division protein FtsI/penicillin-binding protein 2 {ECO:0000313|EMBL:CDM66376.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
cell division protein FtsI/penicillin-binding protein 2
anamox1_curated_scaffold_1323_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

5736..7235
DNA (1500bp) protein (500aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Signal transduction histidine kinase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDF5_CHLTF
signal transduction histidine kinase
anamox1_curated_scaffold_1323_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

7302..8288
DNA (987bp) protein (329aa)
NAD-dependent epimerase/dehydratase Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R4T0_ISOPI
NAD-dependent epimerase/dehydratase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
anamox1_curated_scaffold_1323_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

8233..8892
DNA (660bp) protein (220aa)
Carboxypeptidase regulatory-like domain {ECO:0000313|EMBL:CDM66381.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
anamox1_curated_scaffold_1323_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(8899..9336)
DNA (438bp) protein (146aa)
Hypothetical conserved protein Tax=uncultured Acidobacteria bacterium RepID=H5SBR4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDM66391.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
anamox1_curated_scaffold_1323_10
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(9349..10236)
DNA (888bp) protein (296aa)
Dienelactone hydrolase-like enzyme Tax=Microcoleus sp. PCC 7113 RepID=K9WI36_9CYAN
dienelactone hydrolase-like enzyme
Dienelactone hydrolase-like enzyme {ECO:0000313|EMBL:AFZ20055.1}; Flags: Precursor;; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
anamox1_curated_scaffold_1323_11
unknown

Not on your lists

10318..10581
DNA (264bp) protein (88aa)

This feature has no annotations

anamox1_curated_scaffold_1323_12
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(10603..10896)
DNA (294bp) protein (98aa)
Smr protein/MutS2 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02BT5_SOLUE
Smr protein/MutS2
Smr protein/MutS2 {ECO:0000313|EMBL:ABJ81481.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
anamox1_curated_scaffold_1323_13
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(10896..12047)
DNA (1152bp) protein (384aa)
Putative uncharacterized protein Tax=uncultured Acidobacteria bacterium RepID=Q7X316_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AAP58548.1}; species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
anamox1_curated_scaffold_1323_14
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(12044..13693)
DNA (1650bp) protein (550aa)
Putative uncharacterized protein Tax=uncultured Acidobacteria bacterium RepID=Q7X2T4_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AAP58630.1}; species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
anamox1_curated_scaffold_1323_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

13857..15416
DNA (1560bp) protein (520aa)
IMP cyclohydrolase / phosphoribosylaminoimidazolecarboxamide formyltransferase (EC:2.1.2.3 3.5.4.10)
Bifunctional purine biosynthesis protein PurH Tax=Magnetococcus sp. (strain MC-1) RepID=PUR9_MAGSM
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
anamox1_curated_scaffold_1323_16
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(15548..18232)
DNA (2685bp) protein (895aa)
ComEC/Rec2-related protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDI2_CHLTF
ComEC/Rec2-related protein {ECO:0000313|EMBL:CDM65543.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ComEC/Rec2-like protein
anamox1_curated_scaffold_1323_17
RLO_RIF02_62_27, RIF2, Bacteria

Not on your lists

comp(18240..18530)
DNA (291bp) protein (97aa)
competence protein ComEA-like protein with helix-hairpin-helix repeat region bin=CNBR_ACIDO species=Desulfotomaculum gibsoniae genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
competence protein ComEA helix-hairpin-helix repeat protein
Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
anamox1_curated_scaffold_1323_18
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(18591..21050)
DNA (2460bp) protein (820aa)
DNA translocase FtsK Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQU2_KORVE
DNA segregation ATPase, FtsK/SpoIIIE family {ECO:0000313|EMBL:CDM65359.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
DNA translocase FtsK
anamox1_curated_scaffold_1323_19
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(21069..22121)
DNA (1053bp) protein (351aa)
Bacterial peptide chain release factor 2 (BRF-2) Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LLV6_CHLTF
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
peptide chain release factor 2 (bRF-2)
anamox1_curated_scaffold_1323_20
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(22234..22788)
DNA (555bp) protein (185aa)
Apolipoprotein N-acyltransferase {ECO:0000256|SAAS:SAAS00250216}; EC=2.3.1.- {ECO:0000256|SAAS:SAAS00088950};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Apolipoprotein N-acyltransferase Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AQM5_PELPD
lnt; apolipoprotein N-acyltransferase
Displaying 20 items

View Taxonomy