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anamox1_curated_scaffold_1690

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1690_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

797..1378
DNA (582bp) protein (194aa)
Repeat-containing protein Tax=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) RepID=Q39TL7_GEOMG
repeat-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
anamox1_curated_scaffold_1690_2
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

1498..2280
DNA (783bp) protein (261aa)
hypothetical protein Tax=Pleurocapsa sp. PCC 7319 RepID=UPI00037703C1
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
anamox1_curated_scaffold_1690_3
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

2428..4263
DNA (1836bp) protein (612aa)
TPR repeat domain-containing protein Tax=Anabaena sp. 90 RepID=K7WC06_9NOST
TPR repeats containing protein
Tax=GWF2_Verrucomicrobia_62_7_curated
anamox1_curated_scaffold_1690_4
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5337..7172
DNA (1836bp) protein (612aa)
Peptidase C14 caspase catalytic subunit p20 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IVE4_METNO
peptidase C14 caspase catalytic subunit p20
Peptidase C14 caspase catalytic subunit p20 {ECO:0000313|EMBL:ACL60995.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
anamox1_curated_scaffold_1690_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

7239..10463
DNA (3225bp) protein (1075aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
carbamoyl-phosphate synthase large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase large chain Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LF07_CHLTF
anamox1_curated_scaffold_1690_6
Thermacetogenium phaeum, Thermacetogenium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

10575..11429
DNA (855bp) protein (285aa)
cphB; cyanophycinase CphB (EC:3.4.15.6)
Cyanophycinase CphB {ECO:0000313|EMBL:AFV13005.1}; EC=3.4.15.6 {ECO:0000313|EMBL:AFV13005.1};; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermacetogenium.;" source="Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB).;"
Cyanophycinase CphB Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LM07_THEPS
anamox1_curated_scaffold_1690_7
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

11429..14074
DNA (2646bp) protein (882aa)
Cyanophycin synthetase Tax=Gloeobacter kilaueensis JS1 RepID=U5QLU9_9CYAN
cphA; cyanophycin synthetase
Cyanophycin synthetase {ECO:0000313|EMBL:AGY58665.1}; species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
anamox1_curated_scaffold_1690_8
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

comp(14067..15023)
DNA (957bp) protein (319aa)
asparaginase Tax=Hymenobacter norwichensis RepID=UPI0003B5A6F1
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
anamox1_curated_scaffold_1690_9
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(15160..16131)
DNA (972bp) protein (324aa)
Uncharacterized protein Tax=Fulvivirga imtechensis AK7 RepID=L8JNI5_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
anamox1_curated_scaffold_1690_10
Candidatus Kuenenia stuttgartiensis, Candidatus Kuenenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(16226..18739)
DNA (2514bp) protein (838aa)
Strongly similar to copper-transporting ATPase {ECO:0000313|EMBL:CAJ72992.1}; EC=3.6.3.4 {ECO:0000313|EMBL:CAJ72992.1};; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Kuenenia.;" source="Candidatus Kuenenia stuttgartiensis.;"
Strongly similar to copper-transporting ATPase Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q601_9BACT
copper/silver-translocating P-type ATPase
anamox1_curated_scaffold_1690_11
Halomonas elongata, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18788..19222)
DNA (435bp) protein (145aa)
MerR family transcriptional regulator Tax=Halomonas sp. KM-1 RepID=UPI00028A1C8A
MerR family transcriptional regulator
Putative transcriptional regulator, MerR family {ECO:0000313|EMBL:CBV43736.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB; 2198 / 1H9).;"
anamox1_curated_scaffold_1690_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

19406..20002
DNA (597bp) protein (199aa)
hypothetical protein Tax=Calothrix sp. PCC 7103 RepID=UPI00037BA544
Cysteine-rich secretory protein family {ECO:0000313|EMBL:CDM64936.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
anamox1_curated_scaffold_1690_13
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

20079..21005
DNA (927bp) protein (309aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJA7_CHLTF
anamox1_curated_scaffold_1690_trna_1
unknown

Not on your lists

21007..21078
DNA (72bp)
transferRNA Gln
anamox1_curated_scaffold_1690_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

21184..22140
DNA (957bp) protein (319aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJA6_CHLTF
anamox1_curated_scaffold_1690_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists


22181..22825
DNA (645bp) protein (215aa)
50S ribosomal protein L25 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QR2_SOLUE
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
50S ribosomal protein L25
anamox1_curated_scaffold_1690_16
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

22840..23403
DNA (564bp) protein (188aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJA4_CHLTF
anamox1_curated_scaffold_1690_17
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists


23474..23872
DNA (399bp) protein (133aa)
30S ribosomal protein S6 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZCB2_TERRK
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
30S ribosomal protein S6
anamox1_curated_scaffold_1690_18
Aphanocapsa montana, Aphanocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists


23894..24175
DNA (282bp) protein (94aa)
30S ribosomal protein S18 Tax=Lactobacillus helveticus RepID=C9M0P6_LACHE
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Aphanocapsa.;" source="Aphanocapsa montana BDHKU210001.;"
30S ribosomal protein S18
anamox1_curated_scaffold_1690_19
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists


24253..24843
DNA (591bp) protein (197aa)
50S ribosomal protein L9 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJA2_CHLTF
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
50S ribosomal protein L9
anamox1_curated_scaffold_1690_20
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

25019..26389
DNA (1371bp) protein (457aa)
Primary replicative DNA helicase {ECO:0000313|EMBL:CDM64943.1}; EC=3.6.4.12 {ECO:0000313|EMBL:CDM64943.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Replicative DNA helicase Tax=Clostridium thermocellum RepID=A3DHM9_CLOTH
replicative DNA helicase
anamox1_curated_scaffold_1690_21
Cohnella sp. VKM B-2846, Cohnella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26396..26923
DNA (528bp) protein (176aa)
Putative metal-dependent hydrolase SD71_12305 {ECO:0000256|HAMAP-Rule:MF_01256}; EC=3.-.-.- {ECO:0000256|HAMAP-Rule:MF_01256};; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Cohnella.;" source="Cohnella sp. VKM B-2846.;"
hydrolase Tax=Bacillus sp. 123MFChir2 RepID=UPI000368C932
putative metal-dependent hydrolase yfiT
anamox1_curated_scaffold_1690_22
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27014..28330
DNA (1317bp) protein (439aa)
Uncharacterized protein Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KWC0_HALH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE50270.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
anamox1_curated_scaffold_1690_23
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(28430..28912)
DNA (483bp) protein (161aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM66018.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
anamox1_curated_scaffold_1690_24
GWA2_Elusimicrobia_61_42_curated, Elusimicrobia, Bacteria

Not on your lists

29044..30627
DNA (1584bp) protein (528aa)
Similar to type I restriction modification enzyme M chain bin=GWB2_Elusimicrobium_63_22 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
N-6 DNA methylase
Tax=GWA2_Elusimicrobia_61_42_curated
anamox1_curated_scaffold_1690_25
CG_Flavo_01, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

30638..31126
DNA (489bp) protein (163aa)
transposase Tax=Anaerophaga thermohalophila RepID=UPI0002EB0CF0
transposase
Tax=CG_Flavo_01
anamox1_curated_scaffold_1690_26
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31365..32594
DNA (1230bp) protein (410aa)
hypothetical protein Tax=Thiothrix flexilis RepID=UPI00035D9888
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHL77321.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
anamox1_curated_scaffold_1690_27
Candidatus Omnitrophus sp. SKK-01, Candidatus Omnitrophus, Omnitrophica, Bacteria

Not on your lists

32893..34812
DNA (1920bp) protein (640aa)
putative type I restriction-modification system, restriction subunit (EC:3.1.21.3)
Type I site-specific restriction-modification system, R (Restriction) subunit {ECO:0000313|EMBL:KJJ83527.1}; species="Bacteria; Omnitrophica; Candidatus Omnitrophus.;" source="Candidatus Omnitrophus sp. SKK-01.;"
Type I restriction system, subunit R bin=GWC2_Planctomycete_KSU_39_26 species=Sulfurimonas gotlandica genus=Sulfurimonas taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
Displaying 28 items

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