ggKbase home page

anamox1_curated_scaffold_1881

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1881_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

98..661
DNA (564bp) protein (188aa)
Elongation factor P Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=EFP_GEMAT
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Elongation factor P
anamox1_curated_scaffold_1881_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

751..2067
DNA (1317bp) protein (439aa)
3-deoxy-D-manno-octulosonic-acid transferase {ECO:0000313|EMBL:CDM65846.1}; EC=2.4.99.12 {ECO:0000313|EMBL:CDM65846.1};; EC=2.4.99.13 {ECO:0000313|EMBL:CDM65846.1};; EC=2.4.99.14 {ECO:0000313|EMBL:CDM65846.1};; EC=2.4.99.15 {ECO:0000313|EMBL:CDM65846.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
kdtA; 3-deoxy-D-manno-octulosonic-acid transferase (EC:2.-.-.-)
3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG21_9BACT
anamox1_curated_scaffold_1881_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

2064..3272
DNA (1209bp) protein (403aa)
hypothetical protein Tax=Methylocystis rosea RepID=UPI00037F75F0
Glycosyl transferase {ECO:0000313|EMBL:CDM66968.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
glycosyltransferase
anamox1_curated_scaffold_1881_4
unknown

Not on your lists

3253..3699
DNA (447bp) protein (149aa)
Uncharacterized protein Tax=Methylobacterium sp. (strain 4-46) RepID=B0ULY0_METS4
hypothetical protein
anamox1_curated_scaffold_1881_5
unknown

Not on your lists

3737..4165
DNA (429bp) protein (143aa)

This feature has no annotations

anamox1_curated_scaffold_1881_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

4169..5059
DNA (891bp) protein (297aa)
F0F1-type ATP synthase subunit a (EC:3.6.3.14)
ATP synthase subunit a Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFQ2_CHLTF
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
anamox1_curated_scaffold_1881_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

5297..5614
DNA (318bp) protein (106aa)
F0F1-type ATP synthase, subunit c/archaeal/vacuolar-type H+-ATPase, subunit K {ECO:0000313|EMBL:CDM66973.1}; EC=3.6.3.14 {ECO:0000313|EMBL:CDM66973.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ATP synthase F0 subcomplex C subunit Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IS48_KORVE
H+-transporting two-sector ATPase subunit C
anamox1_curated_scaffold_1881_8
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5738..7231
DNA (1494bp) protein (498aa)
Serine/threonine-protein kinase PKN1 {ECO:0000313|EMBL:ABF89575.1}; EC=2.7.11.1 {ECO:0000313|EMBL:ABF89575.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;"
Serine/threonine-protein kinase PKN1 Tax=Myxococcus xanthus RepID=Q1D3L4_MYXXD
pkn1; serine/threonine-protein kinase PKN1
anamox1_curated_scaffold_1881_9
Geminocystis sp. NIES-3708, Geminocystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(7244..7999)
DNA (756bp) protein (252aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037D9F31
hypothetical protein
Putative membrane protein YfcA {ECO:0000313|EMBL:BAQ61396.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Geminocystis.;" source="Geminocystis sp. NIES-3708.;"
anamox1_curated_scaffold_1881_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(8035..9447)
DNA (1413bp) protein (471aa)
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFU8_CHLTF
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:CDM66986.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
anamox1_curated_scaffold_1881_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

9649..11442
DNA (1794bp) protein (598aa)
Signal peptide peptidase SppA, 67K type {ECO:0000313|EMBL:CDM66879.1}; EC=3.4.21.- {ECO:0000313|EMBL:CDM66879.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Protease IV Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MI46_9BACT
signal peptide peptidase SppA, 67K type
anamox1_curated_scaffold_1881_12
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

11543..13039
DNA (1497bp) protein (499aa)
D-Ala-D-Ala carboxypeptidase 3 family protein Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJQ7_9BACT
D-Ala-D-Ala carboxypeptidase 3 family protein {ECO:0000313|EMBL:ABV27297.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum.;"
peptidase S13 D-Ala-D-Ala carboxypeptidase C
anamox1_curated_scaffold_1881_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

13138..14871
DNA (1734bp) protein (578aa)
Integral membrane protein MviN {ECO:0000313|EMBL:CDM64571.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Integral membrane protein MviN bin=GWD2_Deltaproteobacteria_55_8 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
virulence factor MviN
anamox1_curated_scaffold_1881_14
Hydrogenivirga sp. 128-5-R1-1, Hydrogenivirga, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

14890..15408
DNA (519bp) protein (173aa)
Uncharacterized protein Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V3B2_9AQUI
Uncharacterized protein {ECO:0000313|EMBL:EDP73461.1}; species="Bacteria; Aquificae; Aquificales; Aquificaceae; Hydrogenivirga.;" source="Hydrogenivirga sp. 128-5-R1-1.;"
transferase, hexapeptide repeat family
anamox1_curated_scaffold_1881_15
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists


15447..16079
DNA (633bp) protein (211aa)
hisS; histidyl-tRNA synthetase; K01892 histidyl-tRNA synthetase [EC:6.1.1.21] bin=CNBR_ACIDO species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hisS; histidyl-tRNA synthetase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Displaying 15 items

View Taxonomy