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anamox1_curated_scaffold_4857

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_4857_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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3..185
DNA (183bp) protein (61aa)
Arginine decarboxylase {ECO:0000256|RuleBase:RU003740, ECO:0000256|SAAS:SAAS00212226}; EC=4.1.1.19 {ECO:0000256|RuleBase:RU003740, ECO:0000256|SAAS:SAAS00212226};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
anamox1_curated_scaffold_4857_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

232..1293
DNA (1062bp) protein (354aa)
Deoxyhypusine synthase {ECO:0000313|EMBL:CDM66631.1}; EC=2.5.1.46 {ECO:0000313|EMBL:CDM66631.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
deoxyhypusine synthase (EC:2.5.1.46)
Deoxyhypusine synthase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJC9_CHLTF
anamox1_curated_scaffold_4857_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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1297..2208
DNA (912bp) protein (304aa)
Agmatinase {ECO:0000313|EMBL:CDM66632.1}; EC=3.5.3.11 {ECO:0000313|EMBL:CDM66632.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Agmatinase 1 bin=GWC2_Chlamydiae_50_10 species=Parachlamydia acanthamoebae genus=Parachlamydia taxon_order=Chlamydiales taxon_class=Chlamydiia phylum=Chlamydiae tax=GWC2_Chlamydiae_50_10 organism_group=Chlamydiae organism_desc=Good +
arginase family protein
anamox1_curated_scaffold_4857_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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2292..3767
DNA (1476bp) protein (492aa)
Periplasmic serine protease, Do/DeqQ family {ECO:0000313|EMBL:CDM66410.1}; EC=3.4.21.- {ECO:0000313|EMBL:CDM66410.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Protease Do Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UD7_SOLUE
protease Do
anamox1_curated_scaffold_4857_5
unknown

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3854..4357
DNA (504bp) protein (168aa)

This feature has no annotations

anamox1_curated_scaffold_4857_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(4393..4899)
DNA (507bp) protein (169aa)
Hemerythrin HHE cation binding domain-containing protein {ECO:0000313|EMBL:CDM64951.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
anamox1_curated_scaffold_4857_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(4905..6086)
DNA (1182bp) protein (394aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00038287F6
Nitrate/nitrite transporter {ECO:0000313|EMBL:CDM64950.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Nitrate/nitrite transporter
anamox1_curated_scaffold_4857_8
Formosa agariphila, Formosa, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(6357..7460)
DNA (1104bp) protein (368aa)
Aromatic-L-amino-acid decarboxylase {ECO:0000313|EMBL:CDF78529.1}; EC=4.1.1.28 {ECO:0000313|EMBL:CDF78529.1};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Formosa.;" source="Formosa agariphila KMM 3901.;"
Aromatic-L-amino-acid decarboxylase Tax=Formosa agariphila KMM 3901 RepID=T2KKI6_9FLAO
L-2,4-diaminobutyrate decarboxylase
anamox1_curated_scaffold_4857_9
Imtechella halotolerans, Imtechella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7460..7687)
DNA (228bp) protein (76aa)
Diaminobutyrate decarboxylase Tax=Imtechella halotolerans K1 RepID=I0WGP7_9FLAO
Diaminobutyrate decarboxylase {ECO:0000313|EMBL:EID75563.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Imtechella.;" source="Imtechella halotolerans K1.;"
L-2,4-diaminobutyrate decarboxylase
anamox1_curated_scaffold_4857_10
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7687..8055)
DNA (369bp) protein (123aa)
Uncharacterized protein (Fragment) Tax=mine drainage metagenome RepID=T0YBF7_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KIG12893.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
hypothetical protein
anamox1_curated_scaffold_4857_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

8146..8892
DNA (747bp) protein (249aa)
Nitric oxide-dependent regulator Tax=Galbibacter marinus RepID=K2Q4N7_9FLAO
Iron-sulfur cluster repair di-iron protein {ECO:0000313|EMBL:CDM64089.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
anamox1_curated_scaffold_4857_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

9088..11004
DNA (1917bp) protein (639aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
DNA primase catalytic subunit (EC:2.7.7.-)
DNA primase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHR3_CHLTF
anamox1_curated_scaffold_4857_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

11127..12857
DNA (1731bp) protein (577aa)
RNA polymerase sigma70 factor Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000374241F
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
sigma 38, RpoS
anamox1_curated_scaffold_4857_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(12893..14311)
DNA (1419bp) protein (473aa)
tRNA nucleotidyltransferase/poly(A) polymerase {ECO:0000313|EMBL:CDM64567.1}; EC=2.7.7.72 {ECO:0000313|EMBL:CDM64567.1};; EC=3.1.3.- {ECO:0000313|EMBL:CDM64567.1};; EC=3.1.4.- {ECO:0000313|EMBL:CDM64567.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
polynucleotide adenylyltransferase; K00974 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] bin=CNBR_ACIDO species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
polynucleotide adenylyltransferase
anamox1_curated_scaffold_4857_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists


comp(14320..14790)
DNA (471bp) protein (157aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
glycyl-tRNA synthetase (EC:6.1.1.14)
Glycine--tRNA ligase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LG07_CHLTF
Displaying 15 items

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