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anamox1_curated_scaffold_3109

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_3109_1
unknown

Not on your lists

1..606
DNA (606bp) protein (202aa)

This feature has no annotations

anamox1_curated_scaffold_3109_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

1123..1866
DNA (744bp) protein (248aa)
Putative uncharacterized protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LH96_CHLTF
PA-IL-like protein {ECO:0000313|EMBL:CDM65015.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
anamox1_curated_scaffold_3109_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

1992..3251
DNA (1260bp) protein (420aa)
Putative uncharacterized protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFW3_CHLTF
von Willebrand factor type A domain {ECO:0000313|EMBL:CDM65014.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
anamox1_curated_scaffold_3109_4
unknown

Not on your lists

comp(3393..3797)
DNA (405bp) protein (135aa)

This feature has no annotations

anamox1_curated_scaffold_3109_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(3844..4959)
DNA (1116bp) protein (372aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
aroB; 3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase Tax=Anabaena sp. 90 RepID=K7W5U1_9NOST
anamox1_curated_scaffold_3109_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(4960..6312)
DNA (1353bp) protein (451aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
phosphoglucosamine mutase Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000376793B
phosphoglucosamine mutase
anamox1_curated_scaffold_3109_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

6451..7761
DNA (1311bp) protein (437aa)
Putative uncharacterized protein Tax=NC10 bacterium 'Dutch sediment' RepID=D5MM45_9BACT bin=ACD5 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD5 organism_group=OD1-i organism_desc=OD1-i
Uncharacterized protein {ECO:0000313|EMBL:CDM64252.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
anamox1_curated_scaffold_3109_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(7763..8323)
DNA (561bp) protein (187aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM66447.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
anamox1_curated_scaffold_3109_9
unknown

Not on your lists

8373..8915
DNA (543bp) protein (181aa)

This feature has no annotations

anamox1_curated_scaffold_3109_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

9058..9816
DNA (759bp) protein (253aa)
DNA polymerase III, tau subunit {ECO:0000313|EMBL:CDM66773.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CDM66773.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
DNA polymerase III subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III subunit gamma/tau Tax=uncultured Acidobacteria bacterium RepID=H5SPN5_9BACT
anamox1_curated_scaffold_3109_11
unknown

Not on your lists

10514..10765
DNA (252bp) protein (84aa)

This feature has no annotations

anamox1_curated_scaffold_3109_12

Not on your lists

11544..12266
DNA (723bp) protein (241aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036EB2C7
Uncharacterized protein {ECO:0000313|EMBL:AIA13011.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
anamox1_curated_scaffold_3109_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

12282..12908
DNA (627bp) protein (209aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM67070.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
LemA family protein; K03744 LemA protein bin=CNBR_ACIDO species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
LemA family protein
anamox1_curated_scaffold_3109_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(13022..13294)
DNA (273bp) protein (91aa)
Ethanolamine utilization protein EutN/carboxysome structural protein Ccml Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02C80_SOLUE
Carbon dioxide concentrating mechanism/carboxysome shell protein {ECO:0000313|EMBL:CDM67068.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ethanolamine utilization protein EutN/carboxysome structural protein Ccml
anamox1_curated_scaffold_3109_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(13326..13610)
DNA (285bp) protein (95aa)
Ethanolamine utilization protein EutN/carboxysome structural protein Ccml Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02C81_SOLUE
Carbon dioxide concentrating mechanism/carboxysome shell protein {ECO:0000313|EMBL:CDM67067.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ethanolamine utilization protein EutN/carboxysome structural protein Ccml
anamox1_curated_scaffold_3109_16
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(13641..13910)
DNA (270bp) protein (90aa)
Ethanolamine utilization protein EutN/carboxysome structural protein Ccml Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02C82_SOLUE
Carbon dioxide concentrating mechanism/carboxysome shell protein {ECO:0000313|EMBL:CDM67066.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ethanolamine utilization protein EutN/carboxysome structural protein Ccml
anamox1_curated_scaffold_3109_17
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(13926..14204)
DNA (279bp) protein (93aa)
Carbon dioxide concentrating mechanism/carboxysome shell protein {ECO:0000313|EMBL:CDM67065.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
microcompartments protein bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
microcompartments protein
anamox1_curated_scaffold_3109_18
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(14248..15048)
DNA (801bp) protein (267aa)
Ribulose-5-phosphate 4-epimerase-like epimerase or aldolase {ECO:0000313|EMBL:CDM64466.1}; EC=4.1.2.17 {ECO:0000313|EMBL:CDM64466.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Class II aldolase/adducin family protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02C84_SOLUE
class II aldolase/adducin family protein
anamox1_curated_scaffold_3109_19
unknown

Not on your lists

comp(15128..15430)
DNA (303bp) protein (101aa)

This feature has no annotations

anamox1_curated_scaffold_3109_20
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

15615..16139
DNA (525bp) protein (175aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ruvA; Holliday junction DNA helicase RuvA; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12] bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Holliday junction ATP-dependent DNA helicase ruvA
anamox1_curated_scaffold_3109_21
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

16147..16908
DNA (762bp) protein (254aa)
Abortive infection protein Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GK22_NITSI
Abortive infection protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
anamox1_curated_scaffold_3109_22
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

16918..17949
DNA (1032bp) protein (344aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Holliday junction ATP-dependent DNA helicase RuvB Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LE51_CHLTF
Holliday junction DNA helicase subunit RuvB
anamox1_curated_scaffold_3109_23
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18005..19657
DNA (1653bp) protein (551aa)
Uncharacterized protein Tax=Lactobacillus fermentum 28-3-CHN RepID=D0DUM1_LACFE
Uncharacterized protein {ECO:0000313|EMBL:EEX25256.1}; species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 28-3-CHN.;"
hypothetical protein
anamox1_curated_scaffold_3109_24
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists


comp(19667..22204)
DNA (2538bp) protein (846aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897, ECO:0000256|SAAS:SAAS00075954};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M7S5_GEODF
anamox1_curated_scaffold_3109_25
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

22399..23202
DNA (804bp) protein (268aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM64620.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
anamox1_curated_scaffold_3109_26
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

23226..24002
DNA (777bp) protein (259aa)
Putative uncharacterized protein Tax=uncultured bacterium 164 RepID=E3T703_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDM64620.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
anamox1_curated_scaffold_3109_27
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

24075..24728
DNA (654bp) protein (218aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:CDM64621.1}; EC=2.3.1.51 {ECO:0000313|EMBL:CDM64621.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
1-acyl-sn-glycerol-3-phosphate acyltransferase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEP7_CHLTF
1-acyl-sn-glycerol-3-phosphate acyltransferase
anamox1_curated_scaffold_3109_28
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24820..25704
DNA (885bp) protein (295aa)
Putative uncharacterized protein Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QF06_BRESC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL00491.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903; / NBRC 16000 / CB 81) (Caulobacter subvibrioides).;"
anamox1_curated_scaffold_3109_29
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

25762..26922
DNA (1161bp) protein (387aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558, ECO:0000256|SAAS:SAAS00035312};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
sucC; succinyl-CoA synthetase subunit beta (EC:6.2.1.5)
malate--CoA ligase subunit beta Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003613BED
anamox1_curated_scaffold_3109_30
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27305..27682
DNA (378bp) protein (126aa)
Conserved domain protein (Fragment) Tax=delta proteobacterium NaphS2 RepID=D8EWZ1_9DELT
Conserved domain protein {ECO:0000313|EMBL:EFK11965.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium NaphS2.;"
hypothetical protein
Displaying items 1-30 of 31 in total

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