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anamox1_curated_scaffold_2710

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_2710_1
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

2..577
DNA (576bp) protein (192aa)
Peptidase families S8 and S53 subfamily (Fragment) Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9W6L8_9ACTO bin=RBG9 species=Streptomyces himastatinicus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG9 organism_group=Chloroflexi
Subtilisin
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
anamox1_curated_scaffold_2710_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

720..1991
DNA (1272bp) protein (424aa)
Putative peptidase M16 family protein Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4NI62_KITSK
Predicted Zn-dependent peptidase {ECO:0000313|EMBL:CDM66642.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
putative peptidase M16 family protein
anamox1_curated_scaffold_2710_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

1997..3364
DNA (1368bp) protein (456aa)
Peptidase M16 domain protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D030_9BACT
Predicted Zn-dependent peptidase {ECO:0000313|EMBL:CDM66641.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
peptidase M16 domain-containing protein
anamox1_curated_scaffold_2710_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(3492..4181)
DNA (690bp) protein (230aa)
Single-stranded DNA-binding protein DdrA Tax=Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) RepID=DDRA_DEIRA
Uncharacterized protein {ECO:0000313|EMBL:CDM66649.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
anamox1_curated_scaffold_2710_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

4497..4931
DNA (435bp) protein (145aa)
HTH-type transcriptional regulator Tax=Octadecabacter arcticus 238 RepID=M9RWV3_9RHOB
Predicted transcription factor, MBF1 like protein {ECO:0000313|EMBL:CDM66651.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
DNA-binding protein
anamox1_curated_scaffold_2710_6
unknown

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4931..5290
DNA (360bp) protein (120aa)

This feature has no annotations

anamox1_curated_scaffold_2710_7
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(5369..6400)
DNA (1032bp) protein (344aa)
aroF2; 3-deoxy-7-phosphoheptulonate synthase (EC:2.5.1.54)
3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:ACO32611.1}; EC=2.5.1.54 {ECO:0000313|EMBL:ACO32611.1};; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
3-deoxy-7-phosphoheptulonate synthase Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F361_ACIC5
anamox1_curated_scaffold_2710_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(6443..7246)
DNA (804bp) protein (268aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00031177}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00108586};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
tryptophan synthase subunit alpha (EC:4.2.1.20)
Tryptophan synthase alpha chain Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8WZS2_ACISM
anamox1_curated_scaffold_2710_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(7239..8444)
DNA (1206bp) protein (402aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133, ECO:0000256|SAAS:SAAS00015859};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NI8_SOLUE
anamox1_curated_scaffold_2710_10
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(8464..8811)
DNA (348bp) protein (116aa)
trpF; n-(5'-phosphoribosyl)anthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
N-(5'-phosphoribosyl)anthranilate isomerase Tax=Candidatus Nitrospira defluvii RepID=D8PEV6_9BACT
anamox1_curated_scaffold_2710_11
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8912..9139)
DNA (228bp) protein (76aa)
Phosphoribosylanthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase Tax=Chlorobium phaeobacteroides (strain BS1) RepID=TRPF_CHLPB
Tax=CG_Delta_05
anamox1_curated_scaffold_2710_12
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(9111..9614)
DNA (504bp) protein (168aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UB2_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ86758.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
anamox1_curated_scaffold_2710_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(9607..10401)
DNA (795bp) protein (265aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|SAAS:SAAS00046689}; EC=4.1.1.48 {ECO:0000256|SAAS:SAAS00046705};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Indole-3-glycerol phosphate synthase Tax=Koribacter versatilis (strain Ellin345) RepID=TRPC_KORVE
indole-3-glycerol phosphate synthase
anamox1_curated_scaffold_2710_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(10398..11408)
DNA (1011bp) protein (337aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Anthranilate phosphoribosyltransferase Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FRC3_STIAD
trpD; anthranilate phosphoribosyltransferase
anamox1_curated_scaffold_2710_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(11405..12787)
DNA (1383bp) protein (461aa)
Anthranilate/para-aminobenzoate synthase component I {ECO:0000313|EMBL:CDM65721.1}; EC=4.1.3.27 {ECO:0000313|EMBL:CDM65721.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
anthranilate synthase subunit I (EC:4.1.3.27)
anthranilate synthase, component I (EC:4.1.3.27); K01657 anthranilate synthase component I [EC:4.1.3.27] bin=CNBR_ACIDO species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
anamox1_curated_scaffold_2710_16
RBG_19FT_COMBO_Chloroflexi_49_13_curated, Chloroflexi, Bacteria

Not on your lists

comp(12988..13923)
DNA (936bp) protein (312aa)
hypothetical protein bin=bin1_lowGC species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin1_lowGC organism_group=Unknown_CP
sucraseferredoxin family protein
Tax=RBG_19FT_COMBO_Chloroflexi_49_13_curated
anamox1_curated_scaffold_2710_17
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13937..15181)
DNA (1245bp) protein (415aa)
Cupin 2 barrel domain-containing protein Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K052_SACES
Myc induced nuclear antigen {ECO:0000313|EMBL:CEL14589.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
Cupin 2 barrel domain-containing protein
anamox1_curated_scaffold_2710_18
Plasmodium falciparum, Plasmodium, Haemosporida, Aconoidasida, Apicomplexa, Eukaryota

Not on your lists

comp(15159..15461)
DNA (303bp) protein (101aa)
Putative uncharacterized protein Tax=Plasmodium falciparum (isolate 3D7) RepID=C0H557_PLAF7
Uncharacterized protein {ECO:0000313|EMBL:CAX64234.1}; species="Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania).;" source="Plasmodium falciparum (isolate 3D7).;"
hypothetical protein
anamox1_curated_scaffold_2710_19
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists


comp(15569..17575)
DNA (2007bp) protein (669aa)
Arginyl-tRNA synthetase {ECO:0000313|EMBL:CDM65299.1}; EC=6.1.1.19 {ECO:0000313|EMBL:CDM65299.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
arginyl-tRNA synthetase (EC:6.1.1.19)
Arginyl-tRNA synthetase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHQ5_CHLTF
anamox1_curated_scaffold_2710_20
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

17652..18233
DNA (582bp) protein (194aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase 1 Tax=Cryptobacterium curtum (strain ATCC 700683 / DSM 15641 / 12-3) RepID=C7MPL0_CRYCD
anamox1_curated_scaffold_2710_21
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

18255..19913
DNA (1659bp) protein (553aa)
Putative aminopeptidase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LI46_CHLTF
Predicted aminopeptidase {ECO:0000313|EMBL:CDM65305.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
putative aminopeptidase
anamox1_curated_scaffold_2710_22
Necator americanus, Necator, Rhabditida, Chromadorea, Nematoda, Metazoa

Not on your lists

19979..20245
DNA (267bp) protein (89aa)
Prevent-host-death family protein Tax=Burkholderia ambifaria MEX-5 RepID=B1TGL1_9BURK
Prevent-host-death family protein {ECO:0000313|EMBL:ETN82066.1}; species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Ancylostomatoidea; Ancylostomatidae; Bunostominae; Necator.;" source="Necator americanus (Human hookworm).;"
prevent-host-death family protein
anamox1_curated_scaffold_2710_23
RIFOXYD2_FULL_Planctomycetes_41_16_curated, Planctomycetes, Bacteria

Not on your lists

20242..20646
DNA (405bp) protein (135aa)
Uncharacterized protein Tax=Mycobacterium canettii CIPT 140070017 RepID=L0QYC7_9MYCO
Conserved protein of unknown function, probable VapC16-like toxin (part2)
Tax=RIFOXYD2_FULL_Planctomycetes_41_16_curated
anamox1_curated_scaffold_2710_24
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists


20646..20879
DNA (234bp) protein (78aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Methionine--tRNA ligase Tax=Hydrogenobaculum sp. (strain Y04AAS1) RepID=B4U7D8_HYDS0
methionyl-tRNA synthetase
Displaying 24 items

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