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anamox1_curated_scaffold_825

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_825_1
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

1..333
DNA (333bp) protein (111aa)
Histidine--tRNA ligase bin=GWC2_Chloroflexi_49_37 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
hisS; histidyl-tRNA synthetase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
anamox1_curated_scaffold_825_2
GWC2_Planctomycetes_45_44_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

386..736
DNA (351bp) protein (117aa)
S23 ribosomal protein bin=GWC2_Planctomycetes_45_44 species=Moorea producens genus=Moorea taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
four helix bundle protein
Tax=GWC2_Planctomycetes_45_44_curated
anamox1_curated_scaffold_825_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

853..2016
DNA (1164bp) protein (388aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase Tax=uncultured Acidobacteria bacterium RepID=H5SFD4_9BACT
anamox1_curated_scaffold_825_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

2031..3395
DNA (1365bp) protein (455aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
RIP metalloprotease RseP (EC:3.4.24.-)
RIP metalloprotease RseP Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGX2_CHLTF
anamox1_curated_scaffold_825_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

3430..4536
DNA (1107bp) protein (369aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase bin=GWC2_Deltaproteobacteria_56_8 species=Desulfotomaculum acetoxidans genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
anamox1_curated_scaffold_825_6
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4572..5033)
DNA (462bp) protein (154aa)
Putative uncharacterized protein Tax=Streptomyces flavogriseus (strain ATCC 33331 / DSM 40990 / IAF-45CD) RepID=E8W0H4_STRFA
hypothetical protein
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
anamox1_curated_scaffold_825_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(5030..6067)
DNA (1038bp) protein (346aa)
DNA polymerase III, delta prime subunit {ECO:0000313|EMBL:CDM65534.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CDM65534.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
DNA polymerase III subunit delta' (EC:2.7.7.7)
DNA polymerase III, delta' subunit Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LH08_CHLTF
anamox1_curated_scaffold_825_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(6068..6703)
DNA (636bp) protein (212aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165, ECO:0000256|SAAS:SAAS00031932};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIF1_CHLTF
anamox1_curated_scaffold_825_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(6703..6927)
DNA (225bp) protein (75aa)
RNA-binding protein Hfq Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIF9_KORVE
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
host factor Hfq
anamox1_curated_scaffold_825_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(6977..7933)
DNA (957bp) protein (319aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
tRNA isopentenyltransferase (miaA) (EC:2.5.1.75)
tRNA dimethylallyltransferase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJF0_CHLTF
anamox1_curated_scaffold_825_11

Not on your lists

8049..8474
DNA (426bp) protein (142aa)
osmC; osmotically inducible protein C (EC:1.11.1.-)
hypothetical protein Tax=Arhodomonas aquaeolei RepID=UPI000364E558
Peroxiredoxin, OsmC subfamily {ECO:0000313|EMBL:AIA15832.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
anamox1_curated_scaffold_825_12
unknown

Not on your lists

8746..10095
DNA (1350bp) protein (450aa)

This feature has no annotations

anamox1_curated_scaffold_825_13
Mycoplasma bovigenitalium, Mycoplasma, Mycoplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(10097..10927)
DNA (831bp) protein (277aa)
Type II restriction modification system cytosine-5 DNA methyltransferase and endonuclease fusion protein Tax=Mycoplasma bovigenitalium 51080 RepID=N9VF65_9MOLU
Type II restriction modification system cytosine-5 DNA methyltransferase and endonuclease fusion protein {ECO:0000313|EMBL:ENY70253.1}; species="Bacteria; Tenericutes; Mollicutes; Mycoplasmataceae; Mycoplasma.;" source="Mycoplasma bovigenitalium 51080.;"
hypothetical protein
anamox1_curated_scaffold_825_14
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(10952..13270)
DNA (2319bp) protein (773aa)
SpoIID/LytB domain protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFI3_CHLTF
SpoIID/LytB domain-containing protein
SpoIID/LytB domain protein {ECO:0000313|EMBL:AEP11384.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
anamox1_curated_scaffold_825_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(13312..15663)
DNA (2352bp) protein (784aa)
Peptidase M14, carboxypeptidase A Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028C7_SOLUE
Zinc carboxypeptidase {ECO:0000313|EMBL:CDM65578.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
peptidase M14 carboxypeptidase A
anamox1_curated_scaffold_825_16
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

15688..16536
DNA (849bp) protein (283aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B436CB
1-acyl-sn-glycerol-3-phosphate acyltransferase
anamox1_curated_scaffold_825_17
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(16545..17354)
DNA (810bp) protein (270aa)
Putative uncharacterized protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LI37_CHLTF
Uncharacterized protein {ECO:0000313|EMBL:CDM64407.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
anamox1_curated_scaffold_825_18
RLO_Nitrospirae_42_9, Nitrospirae, Bacteria

Not on your lists

comp(17423..18775)
DNA (1353bp) protein (451aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037C8F3D
hypothetical protein
Tax=RifCSPlowO2_12_Nitrospirae_42_9_curated
anamox1_curated_scaffold_825_19
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(18845..19672)
DNA (828bp) protein (276aa)
Uncharacterized protein family (UPF0153) Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DPN8_SINAD
hypothetical protein
Uncharacterized protein family (UPF0153) {ECO:0000313|EMBL:AGA31339.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
anamox1_curated_scaffold_825_20
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19677..20912)
DNA (1236bp) protein (412aa)
Pkn9 associate protein 1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U9W2_MYXSD
Pkn9 associate protein 1
Pkn9 associate protein 1 {ECO:0000313|EMBL:AGC44337.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
anamox1_curated_scaffold_825_21
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20912..22333)
DNA (1422bp) protein (474aa)
adenylate cyclase, putative Tax=Verrucomicrobium spinosum RepID=UPI00017449BC
phosphopeptide-binding protein
Uncharacterized protein {ECO:0000313|EMBL:CAN94232.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
anamox1_curated_scaffold_825_22
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22337..23965)
DNA (1629bp) protein (543aa)
FHA domain protein Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D3F8_MYXXD
FHA domain-containing protein
FHA domain protein {ECO:0000313|EMBL:ABF92065.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;"
anamox1_curated_scaffold_825_23
unknown

Not on your lists

comp(24005..24424)
DNA (420bp) protein (140aa)

This feature has no annotations

anamox1_curated_scaffold_825_24

Not on your lists

comp(24444..25811)
DNA (1368bp) protein (456aa)
Cystathionine beta-synthase Tax=uncultured Acidobacteria bacterium RepID=H5S9E2_9BACT
Pyridoxal-phosphate dependent enzyme {ECO:0000313|EMBL:AIA12141.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
cystathionine beta-synthase
anamox1_curated_scaffold_825_25
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25884..26648)
DNA (765bp) protein (255aa)
hypothetical protein Tax=Alicyclobacillus pohliae RepID=UPI000373C095
glycerophosphoryl diester phosphodiesterase
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:AEV68697.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
anamox1_curated_scaffold_825_26
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(26645..27289)
DNA (645bp) protein (215aa)
hypothetical protein Tax=Arenimonas oryziterrae RepID=UPI0003B5F5DB
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:CDM64316.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
anamox1_curated_scaffold_825_27
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(27290..28714)
DNA (1425bp) protein (475aa)
Thioredoxin related protein Tax=Rhodopirellula sallentina SM41 RepID=M5TZ22_9PLAN
Thiol-disulfide isomerase-like thioredoxin {ECO:0000313|EMBL:CDM64676.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
thioredoxin
anamox1_curated_scaffold_825_28
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(28736..29860)
DNA (1125bp) protein (375aa)
Glycine oxidase {ECO:0000313|EMBL:CDM64675.1}; EC=1.4.3.19 {ECO:0000313|EMBL:CDM64675.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Glycine oxidase ThiO Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UAZ7_MYXSD
glycine oxidase ThiO
anamox1_curated_scaffold_825_29
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

29927..30949
DNA (1023bp) protein (341aa)
NAD-dependent isocitrate dehydrogenase {ECO:0000313|EMBL:CDM64674.1}; EC=1.1.1.41 {ECO:0000313|EMBL:CDM64674.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
isocitrate dehydrogenase, NAD-dependent, mitochondrial type (EC:1.1.1.41)
Isocitrate dehydrogenase, NAD-dependent, mitochondrial type Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LLB7_CHLTF
anamox1_curated_scaffold_825_30
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30965..31129)
DNA (165bp) protein (55aa)
Neutral endopeptidase PepO {ECO:0000313|EMBL:KFC63018.1}; EC=3.4.24.- {ECO:0000313|EMBL:KFC63018.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
Neutral endopeptidase PepO Tax=Janthinobacterium sp. HH01 RepID=L9PQL2_9BURK
peptidase M13
Displaying 30 items

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