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anamox1_curated_scaffold_3706

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_3706_1
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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1..783
DNA (783bp) protein (261aa)
Uncharacterized protein Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AGB8_IGNAJ
hypothetical protein
Tax=RBG_16_Ignavibacteria_35_7_curated
anamox1_curated_scaffold_3706_2
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

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872..1099
DNA (228bp) protein (76aa)
hypothetical protein Tax=Anaerophaga thermohalophila RepID=UPI0002DC1E46
hypothetical protein
Tax=GWF2_Bacteroidetes_41_31_curated
anamox1_curated_scaffold_3706_3
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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1092..1277
DNA (186bp) protein (62aa)
Putative uncharacterized protein Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W2H7_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT93831.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
anamox1_curated_scaffold_3706_4
unknown

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comp(1264..1446)
DNA (183bp) protein (61aa)

This feature has no annotations

anamox1_curated_scaffold_3706_5
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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1754..2410
DNA (657bp) protein (219aa)
2-Oxo-4-pentenoate hydratase bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
2-Oxo-4-pentenoate hydratase
Tax=RBG_16_Ignavibacteria_34_14_curated
anamox1_curated_scaffold_3706_6
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(2591..3172)
DNA (582bp) protein (194aa)
Holliday junction ATP-dependent DNA helicase RuvA bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
ruvA; Holliday junction resolvasome DNA-binding subunit
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
anamox1_curated_scaffold_3706_7
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists


comp(3241..3615)
DNA (375bp) protein (125aa)
Ribosomal protein S23 Tax=Melioribacter roseus (strain P3M) RepID=I7A2A3_MELRP
30S ribosomal protein S23
Tax=RBG_16_Ignavibacteria_34_14_curated
anamox1_curated_scaffold_3706_8
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(3644..4183)
DNA (540bp) protein (180aa)
ruvC; Holliday junction resolvasome endonuclease subunit; K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4] bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
ruvC; Holliday junction resolvasome endonuclease subunit
anamox1_curated_scaffold_3706_9
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(4208..4954)
DNA (747bp) protein (249aa)
Probable transcriptional regulatory protein IALB_0317 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AGC2_IGNAJ
hypothetical protein
Probable transcriptional regulatory protein IALB_0317 {ECO:0000256|HAMAP-Rule:MF_00693}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
anamox1_curated_scaffold_3706_10
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(4968..6680)
DNA (1713bp) protein (571aa)
ial:IALB_0318 recJ; ssDNA-specific exonuclease RecJ; K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
recJ; ssDNA-specific exonuclease RecJ
Tax=RBG_16_Ignavibacteria_36_9_curated
anamox1_curated_scaffold_3706_11
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(7242..7967)
DNA (726bp) protein (242aa)
Zn-ribbon protein Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AGC4_IGNAJ
Zn-ribbon protein
Tax=RBG_16_Ignavibacteria_36_9_curated
anamox1_curated_scaffold_3706_12
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(7970..9130)
DNA (1161bp) protein (387aa)
Putative GTP cyclohydrolase 1 type 2 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AGC5_IGNAJ
hypothetical protein
Tax=RBG_16_Ignavibacteria_36_9_curated
anamox1_curated_scaffold_3706_13
unknown

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comp(9143..9274)
DNA (132bp) protein (44aa)

This feature has no annotations

Displaying 13 items

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