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anamox1_curated_scaffold_6144

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_6144_trna_1
unknown

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comp(200..284)
DNA (85bp)
transferRNA Ser
anamox1_curated_scaffold_6144_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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comp(726..3194)
DNA (2469bp) protein (823aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037764D6
surface antigen (D15)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
anamox1_curated_scaffold_6144_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3200..3937
DNA (738bp) protein (246aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036C9842
tRNA/rRNA methyltransferase SpoU
tRNA/rRNA methyltransferase (SpoU) {ECO:0000313|EMBL:AEV98365.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_6144_3
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(3938..5011)
DNA (1074bp) protein (358aa)
Quinoprotein glucose dehydrogenase Tax=Flavobacterium limnosediminis JC2902 RepID=V6SXJ4_9FLAO
Quinoprotein glucose dehydrogenase {ECO:0000313|EMBL:ESU29130.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
hypothetical protein
anamox1_curated_scaffold_6144_4
Anditalea andensis, Anditalea, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(5151..5549)
DNA (399bp) protein (133aa)
gdhB; L-sorbosone dehydrogenase (EC:1.1.5.2)
hypothetical protein Tax=Lewinella persica RepID=UPI00036D34AE
Uncharacterized protein {ECO:0000313|EMBL:KEO73791.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Anditalea.;" source="Anditalea andensis.;"
anamox1_curated_scaffold_6144_5
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5676..7919
DNA (2244bp) protein (748aa)
hypothetical protein Tax=Lewinella cohaerens RepID=UPI000371E60E
Uncharacterized protein {ECO:0000313|EMBL:GAO41661.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
anamox1_curated_scaffold_6144_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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comp(7916..9292)
DNA (1377bp) protein (459aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036DAD90
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
anamox1_curated_scaffold_6144_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(9356..10015)
DNA (660bp) protein (220aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000379BCD2
signal peptidase II
anamox1_curated_scaffold_6144_8
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(10166..10783)
DNA (618bp) protein (206aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037B4D7A
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIC92869.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
ABC transporter
anamox1_curated_scaffold_6144_9
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(10795..11283)
DNA (489bp) protein (163aa)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|SAAS:SAAS00064156}; EC=2.3.1.129 {ECO:0000256|SAAS:SAAS00001267};; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
Acyl-(Acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EIN6_RUNSL
acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase
anamox1_curated_scaffold_6144_10
Tannerella sp. oral taxon BU063, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11301..11585)
DNA (285bp) protein (95aa)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|SAAS:SAAS00064156}; EC=2.3.1.129 {ECO:0000256|SAAS:SAAS00001267};; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. oral taxon BU063 isolate Cell 6/7/9.;"
UDP-N-acetylglucosamine acyltransferase (EC:2.3.1.129)
Acyl-(Acyl-carrier-protein)-UDP-N-acetylglucosamine acyltransferase Tax=Parabacteroides RepID=A6LDS3_PARD8
anamox1_curated_scaffold_6144_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(11582..13003)
DNA (1422bp) protein (474aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|SAAS:SAAS00064869}; EC=3.5.1.- {ECO:0000256|SAAS:SAAS00041386};; EC=4.2.1.59 {ECO:0000256|SAAS:SAAS00064862};; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|SAAS:SAAS00041388}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003732E0F
UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase, 3-hydroxyacyl-(acyl-carrier-protein) dehydratase
anamox1_curated_scaffold_6144_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(13090..14136)
DNA (1047bp) protein (349aa)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
UDP-3-O-acylglucosamine N-acyltransferase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP64_NIAKG
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase
anamox1_curated_scaffold_6144_13
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14159..15379)
DNA (1221bp) protein (407aa)
Metal dependent phosphohydrolase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP65_NIAKG
Phosphohydrolase {ECO:0000313|EMBL:KIC92865.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
metal dependent phosphohydrolase
anamox1_curated_scaffold_6144_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15511..16926
DNA (1416bp) protein (472aa)
chemotaxis protein CheY Tax=Segetibacter koreensis RepID=UPI0003740966
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:AEW03184.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_6144_15
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16977..17564)
DNA (588bp) protein (196aa)
Riboflavin synthase, alpha subunit Tax=Niabella soli DSM 19437 RepID=H1NKV3_9SPHI
riboflavin synthase subunit alpha
Riboflavin synthase subunit alpha {ECO:0000313|EMBL:AHF14398.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Displaying 16 items

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