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anamox1_curated_scaffold_1181

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1181_1
unknown

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1..243
DNA (243bp) protein (81aa)

This feature has no annotations

anamox1_curated_scaffold_1181_2
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(298..1161)
DNA (864bp) protein (288aa)
Kef-type K+ transport system NAD-binding protein Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CMZ6_ELIME
Cyclic nucleotide-gated potassium channel
Kef-type K+ transport system NAD-binding protein {ECO:0000313|EMBL:EOR30678.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535.;"
anamox1_curated_scaffold_1181_3
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1768..2478
DNA (711bp) protein (237aa)
Probable transcriptional regulatory protein Cpin_1650 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUA6_CHIPD
hypothetical protein
Probable transcriptional regulatory protein Cpin_1650 {ECO:0000256|HAMAP-Rule:MF_00693}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
anamox1_curated_scaffold_1181_4
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2631..3665
DNA (1035bp) protein (345aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
ribosomal large subunit pseudouridine synthase D Tax=Niabella aurantiaca RepID=UPI000360F8E9
ribosomal large subunit pseudouridine synthase D
anamox1_curated_scaffold_1181_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3759..4898)
DNA (1140bp) protein (380aa)
Phosphoribosylformylglycinamidine cyclo-ligase Tax=Niabella soli DSM 19437 RepID=H1NMH8_9SPHI
phosphoribosylformylglycinamidine cyclo-ligase
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000313|EMBL:AHF14696.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox1_curated_scaffold_1181_6
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5010..7811)
DNA (2802bp) protein (934aa)
TonB-dependent receptor Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PG79_CHIPD
TonB-dependent receptor {ECO:0000313|EMBL:ACU59811.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
TonB-dependent receptor
anamox1_curated_scaffold_1181_7
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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7944..8885
DNA (942bp) protein (314aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Riboflavin biosynthesis protein RibF Tax=Niabella soli DSM 19437 RepID=H1NMH9_9SPHI
riboflavin biosynthesis protein RibF
anamox1_curated_scaffold_1181_8
unknown

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comp(8976..9245)
DNA (270bp) protein (90aa)

This feature has no annotations

anamox1_curated_scaffold_1181_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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9330..10919
DNA (1590bp) protein (530aa)
carboxypeptidase Tax=Spirosoma spitsbergense RepID=UPI00036FD445
peptidase S10 serine carboxypeptidase
Peptidase S10 serine carboxypeptidase {ECO:0000313|EMBL:AEV97926.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_1181_10
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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11097..12749
DNA (1653bp) protein (551aa)
Peptidase S8 and S53 subtilisin kexin sedolisin Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQY5_NIAKG
Peptidase S8 family protein {ECO:0000313|EMBL:GAO44406.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
peptidase S8 and S53 subtilisin kexin sedolisin
anamox1_curated_scaffold_1181_11
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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12921..13448
DNA (528bp) protein (176aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000361507F
damage-inducible protein DinB
Tax=RBG_16_Ignavibacteria_36_9_curated
anamox1_curated_scaffold_1181_12
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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14016..15500
DNA (1485bp) protein (495aa)
Cardiolipin synthase {ECO:0000256|HAMAP-Rule:MF_01916}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01916};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01916};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Phospholipase D/Transphosphatidylase Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PIR1_CHIPD
phospholipase D
anamox1_curated_scaffold_1181_13
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(15607..16029)
DNA (423bp) protein (141aa)
Type III restriction protein res subunit Tax=Galbibacter marinus RepID=K2QHK2_9FLAO
Type III restriction protein res subunit {ECO:0000313|EMBL:EKF54212.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbibacter marinus.;"
ATP-dependent helicase IRC3
anamox1_curated_scaffold_1181_14
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(16046..16720)
DNA (675bp) protein (225aa)
Serine protease, peptidase S9 family Tax=Psychroflexus torquis (strain ATCC 700755 / ACAM 623) RepID=K4IJB2_PSYTT
Serine protease, peptidase S9 family protein {ECO:0000313|EMBL:KEY19602.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
serine protease, peptidase S9 family
anamox1_curated_scaffold_1181_15

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comp(16830..17807)
DNA (978bp) protein (326aa)
hypothetical protein Tax=Bacteroides propionicifaciens RepID=UPI00035D608F
Licheninase {ECO:0000313|EMBL:EJW93242.1}; species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
glycoside hydrolase family protein
anamox1_curated_scaffold_1181_16
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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17947..19257
DNA (1311bp) protein (437aa)
Natural resistance-associated macrophage protein Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YAR4_9SPHI
Natural resistance-associated macrophage protein {ECO:0000313|EMBL:EHQ29523.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
NRAMP family Mn2+/Fe2+ transporter
anamox1_curated_scaffold_1181_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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19518..21020
DNA (1503bp) protein (501aa)
YjeF-related protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAL0_NIAKG
hypothetical protein
YjeF-related protein {ECO:0000313|EMBL:AEV98172.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_1181_18
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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21138..23411
DNA (2274bp) protein (758aa)
Uncharacterized protein Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PE64_CHIPD
Uncharacterized protein {ECO:0000313|EMBL:KIC92715.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
anamox1_curated_scaffold_1181_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23580..24692
DNA (1113bp) protein (371aa)
Glycosyl transferase group 1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDB8_NIAKG
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:AEV99358.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_1181_20
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24731..25738
DNA (1008bp) protein (336aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036E0255
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACU62140.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
anamox1_curated_scaffold_1181_21
Paenibacillus sp. HGF7, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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26099..26836
DNA (738bp) protein (246aa)
Uncharacterized protein Tax=Paenibacillus RepID=F5LMB7_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EGL16507.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. HGF7.;"
hypothetical protein
anamox1_curated_scaffold_1181_22
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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26884..27714
DNA (831bp) protein (277aa)
Glycosyl transferase family 2 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDB0_NIAKG
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:AEV99350.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_1181_23
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(27733..28449)
DNA (717bp) protein (239aa)
Methyltransferase type 11 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDA8_NIAKG
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:AEV99348.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying 23 items

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