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anamox1_curated_scaffold_1256

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1256_1
unknown

Not on your lists

comp(1..147)
DNA (147bp) protein (49aa)

This feature has no annotations

anamox1_curated_scaffold_1256_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

495..1178
DNA (684bp) protein (228aa)
Two component transcriptional regulator, LuxR family Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9W7_NIAKG
two component transcriptional regulator, LuxR family
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEW01311.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_1256_3
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(1216..2628)
DNA (1413bp) protein (471aa)
Surface antigen variable number repeat-containing protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THG8_NIAKG
surface antigen variable number repeat-containing protein
Tax=BJP_IG2103_Bacteroidetes_41_9
anamox1_curated_scaffold_1256_4
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2628..3290)
DNA (663bp) protein (221aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI000380AD7E
Uncharacterized protein {ECO:0000313|EMBL:KIC94783.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
anamox1_curated_scaffold_1256_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(3371..4144)
DNA (774bp) protein (258aa)
alpha/beta hydrolase Tax=Segetibacter koreensis RepID=UPI0003716B6F
alpha/beta hydrolase fold protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
anamox1_curated_scaffold_1256_6
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4270..4779)
DNA (510bp) protein (170aa)
Colicin V production protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THG5_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO42840.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
colicin V production protein
anamox1_curated_scaffold_1256_7
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4790..5245)
DNA (456bp) protein (152aa)
Uncharacterized protein Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMJ9_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU58543.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
anamox1_curated_scaffold_1256_8
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5267..5611)
DNA (345bp) protein (115aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036B4C7D
Gliding motility protein GldC {ECO:0000313|EMBL:KIC92132.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
gliding motility protein GldC
anamox1_curated_scaffold_1256_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5710..6372
DNA (663bp) protein (221aa)
Putative transcriptional regulator, Crp/Fnr family Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQJ1_NIAKG
Crp family transcriptional regulator
Putative transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:AEW03238.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_1256_10
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6378..7376)
DNA (999bp) protein (333aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037BFCA1
DNA polymerase III subunit delta {ECO:0000313|EMBL:KIC90024.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
DNA polymerase III subunit delta
anamox1_curated_scaffold_1256_11
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7500..8483
DNA (984bp) protein (328aa)
Uncharacterized protein Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PL20_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU63930.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
anamox1_curated_scaffold_1256_12
unknown

Not on your lists

8531..8701
DNA (171bp) protein (57aa)

This feature has no annotations

anamox1_curated_scaffold_1256_13
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(8615..8971)
DNA (357bp) protein (119aa)
Single-stranded DNA-binding protein Tax=Gramella forsetii (strain KT0803) RepID=A0M0Q6_GRAFK
ssb; single-stranded DNA-binding protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
anamox1_curated_scaffold_1256_14
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9326..9706
DNA (381bp) protein (127aa)
glycine cleavage system protein H Tax=Niabella aurantiaca RepID=UPI00036BDE24
glycine cleavage system protein H
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox1_curated_scaffold_1256_15
unknown

Not on your lists

comp(9560..9982)
DNA (423bp) protein (141aa)

This feature has no annotations

anamox1_curated_scaffold_1256_16
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10208..10756)
DNA (549bp) protein (183aa)
Uncharacterized protein Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HWW4_9SPHI
LuxR family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:ERJ60017.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
anamox1_curated_scaffold_1256_17
GWF2_Bacteroidetes_40_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10884..12089
DNA (1206bp) protein (402aa)
FecR protein bin=GWF2_Bacteroidetes_40_14 species=Pedobacter heparinus genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
anti-FecI sigma factor FecR
Tax=GWF2_Bacteroidetes_40_14_curated
anamox1_curated_scaffold_1256_18
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12133..15834
DNA (3702bp) protein (1234aa)
TonB-linked outer membrane protein Tax=Pedobacter agri RepID=UPI000299DC25
TonB-dependent receptor plug {ECO:0000313|EMBL:ACU61211.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
TonB-dependent receptor plug
anamox1_curated_scaffold_1256_19
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15847..17343
DNA (1497bp) protein (499aa)
Uncharacterized protein Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PB72_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU61210.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
anamox1_curated_scaffold_1256_20
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17371..18738
DNA (1368bp) protein (456aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI00036162B4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00371.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_1256_21
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18780..19283
DNA (504bp) protein (168aa)
hypothetical protein Tax=Dyadobacter beijingensis RepID=UPI000364A5E8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU61208.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
anamox1_curated_scaffold_1256_22
Sphingobacterium sp. ACCC 05744, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19243..20022
DNA (780bp) protein (260aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI00037EBDEC
Uncharacterized protein {ECO:0000313|EMBL:KGE13960.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ACCC 05744.;"
anamox1_curated_scaffold_1256_23
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20119..22227)
DNA (2109bp) protein (703aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036501D5
Uncharacterized protein {ECO:0000313|EMBL:KIC95634.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
anamox1_curated_scaffold_1256_24
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22318..23229)
DNA (912bp) protein (304aa)
Glycosyl transferase Tax=uncultured bacterium RepID=K2C207_9BACT
glycosyl transferase
Tax=GWA2_Bacteroidetes_30_7_curated
anamox1_curated_scaffold_1256_25
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23408..23953)
DNA (546bp) protein (182aa)
Blue (Type 1) copper domain protein Tax=Sphingobacterium sp. (strain 21) RepID=F4C6T5_SPHS2
blue (type 1) copper domain-containing protein
Blue (Type 1) copper domain protein {ECO:0000313|EMBL:ADZ78251.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
anamox1_curated_scaffold_1256_26
unknown

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24042..24281
DNA (240bp) protein (80aa)

This feature has no annotations

anamox1_curated_scaffold_1256_27
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24404..28213
DNA (3810bp) protein (1270aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
DNA-directed RNA polymerase subunit beta Tax=Segetibacter koreensis RepID=UPI0003755D57
DNA-directed RNA polymerase subunit beta
anamox1_curated_scaffold_1256_28
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28263..32555
DNA (4293bp) protein (1431aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
DNA-directed RNA polymerase subunit beta'''' Tax=Segetibacter koreensis RepID=UPI0003677F0A
DNA-directed RNA polymerase subunit beta'
anamox1_curated_scaffold_1256_29
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32640..33062)
DNA (423bp) protein (141aa)
Uncharacterized protein Tax=Pontibacter sp. BAB1700 RepID=J0V4E0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KJS04016.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
hypothetical protein
anamox1_curated_scaffold_1256_30
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

33241..34095
DNA (855bp) protein (285aa)
Uncharacterized protein Tax=Chryseobacterium sp. CF314 RepID=J3CHP9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFF21727.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
Protein of unknown function, Porph ging
Displaying items 1-30 of 38 in total

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