ggKbase home page

anamox1_curated_scaffold_202

Search features with annotation key words

Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_202_1
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3..1628)
DNA (1626bp) protein (542aa)
Uncharacterized protein Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAJ2_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU61196.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
anamox1_curated_scaffold_202_2
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1657..2010)
DNA (354bp) protein (118aa)
Uncharacterized protein Tax=Niabella soli DSM 19437 RepID=H1NML8_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KIC89978.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
anamox1_curated_scaffold_202_3
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2038..4479)
DNA (2442bp) protein (814aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037CE1B9
Acyl-homoserine-lactone acylase {ECO:0000313|EMBL:KIC89977.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
acyl-homoserine-lactone acylase
anamox1_curated_scaffold_202_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

4619..5230
DNA (612bp) protein (204aa)
tRNA-hydroxylase Tax=Niabella aurantiaca RepID=UPI0003715824
tRNA-hydroxylase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
anamox1_curated_scaffold_202_5
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


5257..7041
DNA (1785bp) protein (595aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
Arginine--tRNA ligase Tax=Niabella soli DSM 19437 RepID=H1NJI0_9SPHI
arginyl-tRNA synthetase
anamox1_curated_scaffold_202_6
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7161..8180
DNA (1020bp) protein (340aa)
Fructose-1,6-bisphosphatase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; Short=FBPase class 1 {ECO:0000256|HAMAP-Rule:MF_01855};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01855, ECO:0000256|SAAS:SAAS00181223};; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
Fructose-1,6-bisphosphatase class 1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGK5_NIAKG
D-fructose 1,6-bisphosphatase
anamox1_curated_scaffold_202_7
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8314..9054
DNA (741bp) protein (247aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000370A93B
FKBP-type peptidylprolyl isomerase
anamox1_curated_scaffold_202_8
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9066..9611
DNA (546bp) protein (182aa)
NUDIX hydrolase Tax=Niabella soli DSM 19437 RepID=H1NLT4_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KIC89949.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
DNA repair protein MutT
anamox1_curated_scaffold_202_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9593..10927)
DNA (1335bp) protein (445aa)
FolC bifunctional protein {ECO:0000313|EMBL:AEV98442.1}; EC=6.3.2.17 {ECO:0000313|EMBL:AEV98442.1};; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
FolC bifunctional protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFL1_NIAKG
bifunctional folylpolyglutamate synthase/dihydrofolate synthase
anamox1_curated_scaffold_202_10
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11006..12169)
DNA (1164bp) protein (388aa)
Beta-lactamase Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PB75_CHIPD
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:ACU61213.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
anamox1_curated_scaffold_202_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12227..13465
DNA (1239bp) protein (413aa)
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:AEV98174.1}; EC=1.1.1.95 {ECO:0000313|EMBL:AEV98174.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
D-3-phosphoglycerate dehydrogenase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAL2_NIAKG
D-3-phosphoglycerate dehydrogenase
anamox1_curated_scaffold_202_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

13587..14903
DNA (1317bp) protein (439aa)
aspartate kinase Tax=Segetibacter koreensis RepID=UPI0003761C56
aspartate kinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
anamox1_curated_scaffold_202_13
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14994..15947)
DNA (954bp) protein (318aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGH2_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC90161.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
anamox1_curated_scaffold_202_14
unknown

Not on your lists

16164..16304
DNA (141bp) protein (47aa)

This feature has no annotations

anamox1_curated_scaffold_202_15
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16361..16681
DNA (321bp) protein (107aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGH3_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC94454.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
anamox1_curated_scaffold_202_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16731..17231
DNA (501bp) protein (167aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Peptidyl-prolyl cis-trans isomerase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGH4_NIAKG
FKBP-type peptidylprolyl isomerase
anamox1_curated_scaffold_202_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17759..18511
DNA (753bp) protein (251aa)
Transcriptional regulator, DeoR family Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE93_NIAKG
DeoR family transcriptional regulator
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:AEV97284.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_202_18
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18583..19992)
DNA (1410bp) protein (470aa)
Nucleoside recognition domain-containing protein Tax=Elizabethkingia anophelis RepID=H0KR33_9FLAO
Spore maturation protein {ECO:0000313|EMBL:KIA90100.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
spmA; Spore maturation protein A
anamox1_curated_scaffold_202_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20135..22123
DNA (1989bp) protein (663aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Ribonuclease R Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF88_NIAKG
ribonuclease R
anamox1_curated_scaffold_202_20
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22123..23100
DNA (978bp) protein (326aa)
Geranyltranstransferase {ECO:0000313|EMBL:AEV97299.1}; EC=2.5.1.10 {ECO:0000313|EMBL:AEV97299.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Geranyltranstransferase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF89_NIAKG
geranyltranstransferase
anamox1_curated_scaffold_202_21
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23176..24288
DNA (1113bp) protein (371aa)
Chitinase {ECO:0000313|EMBL:AEW00737.1}; EC=3.2.1.14 {ECO:0000313|EMBL:AEW00737.1};; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Chitinase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIC0_NIAKG
chitinase
anamox1_curated_scaffold_202_22
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24299..24709)
DNA (411bp) protein (137aa)
Uncharacterized protein Tax=Kordia algicida OT-1 RepID=A9E2S6_9FLAO
OsmC family protein {ECO:0000313|EMBL:KIC91830.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
anamox1_curated_scaffold_202_23
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24756..25532
DNA (777bp) protein (259aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003795436
Uncharacterized protein {ECO:0000313|EMBL:KIC93832.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
anamox1_curated_scaffold_202_24
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

25532..26485
DNA (954bp) protein (318aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGR6_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
anamox1_curated_scaffold_202_25
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26610..28241)
DNA (1632bp) protein (544aa)
Uncharacterized protein Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GNN0_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EOR93328.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
amidohydrolase
anamox1_curated_scaffold_202_26
Alistipes sp. CAG:435, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28386..28727
DNA (342bp) protein (114aa)
Secreted protein Tax=Alistipes sp. CAG:435 RepID=R6XG05_9BACT
Secreted protein {ECO:0000313|EMBL:CDD15276.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:435.;"
secreted protein
anamox1_curated_scaffold_202_27
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28913..32512
DNA (3600bp) protein (1200aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
DNA polymerase III, alpha subunit Tax=Niabella soli DSM 19437 RepID=H1NJS7_9SPHI
DNA polymerase III subunit alpha
anamox1_curated_scaffold_202_28
unknown

Not on your lists

comp(32528..32848)
DNA (321bp) protein (107aa)

This feature has no annotations

anamox1_curated_scaffold_202_29
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32806..33234)
DNA (429bp) protein (143aa)
hypothetical protein Tax=Pedobacter arcticus RepID=UPI0002DEA3ED
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:ACU05498.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
anamox1_curated_scaffold_202_30
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

33483..34760
DNA (1278bp) protein (426aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000368BC77
1,4-alpha-glucan branching protein {ECO:0000313|EMBL:KIC93333.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
alpha amylase
Displaying items 1-30 of 73 in total

View Taxonomy