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anamox1_curated_scaffold_649

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_649_1
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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315..3680
DNA (3366bp) protein (1122aa)
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:ACU58566.1}; EC=5.4.99.2 {ECO:0000313|EMBL:ACU58566.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Methylmalonyl-CoA mutase Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMM2_CHIPD
methylmalonyl-CoA mutase
anamox1_curated_scaffold_649_2
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3715..4509
DNA (795bp) protein (265aa)
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRR2_CHIPD
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD {ECO:0000313|EMBL:ACU58955.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
anamox1_curated_scaffold_649_3
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4608..5771
DNA (1164bp) protein (388aa)
Uncharacterized protein Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PSN3_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU64482.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
anamox1_curated_scaffold_649_4
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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5825..8662
DNA (2838bp) protein (946aa)
Peptidase S9, prolyl oligopeptidase active site domain protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01S62_SOLUE
peptidase S9 prolyl oligopeptidase
Peptidase S9, prolyl oligopeptidase active site domain protein {ECO:0000313|EMBL:ABJ87508.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
anamox1_curated_scaffold_649_5
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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8798..9376
DNA (579bp) protein (193aa)
Uncharacterized protein {ECO:0000313|EMBL:KFE98033.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
Metal dependent phosphohydrolase bin=GWF2_Lentisphaerae_49_21 species=Dyadobacter fermentans genus=Dyadobacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
metal-dependent phosphohydrolase HD sub domain-containing protein
anamox1_curated_scaffold_649_6
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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9390..10265
DNA (876bp) protein (292aa)
Metal dependent phosphohydrolase Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RUX5_LEAB4
Membrane protein {ECO:0000313|EMBL:KFE98032.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
metal dependent phosphohydrolase
anamox1_curated_scaffold_649_7
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(10373..10744)
DNA (372bp) protein (124aa)
Putative uncharacterized protein Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11SH4_CYTH3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG59640.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;"
anamox1_curated_scaffold_649_8
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(10893..11933)
DNA (1041bp) protein (347aa)
Adenylate/guanylate cyclase bin=GWF2_Bacteroidetes_49_14 species=Psychroflexus gondwanensis genus=Psychroflexus taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
adenylate/guanylate cyclase
Tax=GWF2_Bacteroidetes_49_14_curated
anamox1_curated_scaffold_649_9
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(11935..12309)
DNA (375bp) protein (125aa)
Response regulator receiver protein Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W500_DYAFD
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ACT92360.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
anamox1_curated_scaffold_649_10
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(12320..13699)
DNA (1380bp) protein (460aa)
hypothetical protein Tax=Spirosoma panaciterrae RepID=UPI0003695A2B
histidine kinase
Histidine kinase {ECO:0000313|EMBL:AKD53553.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
anamox1_curated_scaffold_649_11
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(14542..16398)
DNA (1857bp) protein (619aa)
hypothetical protein Tax=Hymenobacter aerophilus RepID=UPI00035E4CB1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ64416.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
anamox1_curated_scaffold_649_12
unknown

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comp(16468..16596)
DNA (129bp) protein (43aa)

This feature has no annotations

anamox1_curated_scaffold_649_13

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comp(16659..17564)
DNA (906bp) protein (302aa)
hypothetical protein Tax=Aminicenantes bacterium SCGC AAA252-K06 RepID=UPI0003B3F2C6
Marine sediment metagenome DNA, contig: S01H4_S17605 {ECO:0000313|EMBL:GAH14166.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
anamox1_curated_scaffold_649_14
unknown

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comp(17628..18071)
DNA (444bp) protein (148aa)

This feature has no annotations

anamox1_curated_scaffold_649_15
unknown

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comp(18219..19052)
DNA (834bp) protein (278aa)
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI0003656678
anamox1_curated_scaffold_649_16
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19477..22710)
DNA (3234bp) protein (1078aa)
Putative exported peptidase Tax=Pedobacter sp. BAL39 RepID=A6EGB1_9SPHI
Peptidase S41 family protein {ECO:0000313|EMBL:GAO45056.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
peptidase S41
anamox1_curated_scaffold_649_17
unknown

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comp(23102..23368)
DNA (267bp) protein (89aa)

This feature has no annotations

anamox1_curated_scaffold_649_18
unknown

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23493..23768
DNA (276bp) protein (92aa)

This feature has no annotations

anamox1_curated_scaffold_649_19
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

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comp(23785..28023)
DNA (4239bp) protein (1413aa)
Histidine kinase-like ATPase Tax=Melioribacter roseus P3M RepID=I6YS34_MELRP bin=RAAC39 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
two-component system sensor histidine kinase/response regulator hybrid
Tax=BJP_IG2103_Bacteroidetes_37_22
anamox1_curated_scaffold_649_20
unknown

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comp(28215..28700)
DNA (486bp) protein (162aa)

This feature has no annotations

anamox1_curated_scaffold_649_21
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(29113..31104)
DNA (1992bp) protein (664aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003660802
multi-sensor signal transduction histidine kinase
anamox1_curated_scaffold_649_22
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

comp(31116..31691)
DNA (576bp) protein (192aa)
Integral membrane sensor signal transduction histidine kinase Tax=Psychroflexus gondwanensis ACAM 44 RepID=N1WS47_9FLAO
integral membrane sensor signal transduction histidine kinase
Tax=BJP_IG2103_Bacteroidetes_37_22
anamox1_curated_scaffold_649_23
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(31723..32595)
DNA (873bp) protein (291aa)
hypothetical protein Tax=Spirosoma luteum RepID=UPI0003667E09
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABJ81749.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
anamox1_curated_scaffold_649_24
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(33202..36189)
DNA (2988bp) protein (996aa)
Amidohydrolase Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFD4_9GAMM
Amidohydrolase {ECO:0000313|EMBL:EIL98175.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
amidohydrolase
Displaying 24 items

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