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anamox2_curated_scaffold_4376

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox2_curated_scaffold_4376_1
unknown

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3..149
DNA (147bp) protein (49aa)

This feature has no annotations

anamox2_curated_scaffold_4376_2
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

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151..501
DNA (351bp) protein (117aa)
Regulator of competence-specific genes bin=GWD2_Nitrospirae-related_57_8 species=Desulfosporosinus meridiei genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
TfoX domain-containing protein
Tax=GWC2_Nitrospirae_57_13_curated
anamox2_curated_scaffold_4376_3
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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838..1377
DNA (540bp) protein (180aa)
Transcriptional regulators-like protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D0C4_9BACT
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AIE85474.1}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
anamox2_curated_scaffold_4376_4
unknown

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1433..2065
DNA (633bp) protein (211aa)

This feature has no annotations

anamox2_curated_scaffold_4376_5
unknown

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comp(2196..2474)
DNA (279bp) protein (93aa)

This feature has no annotations

anamox2_curated_scaffold_4376_6
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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comp(2788..3780)
DNA (993bp) protein (331aa)
hypothetical protein Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B796E7
cellulase
Cellulase {ECO:0000313|EMBL:AIE87158.1}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
anamox2_curated_scaffold_4376_7
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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comp(3866..6418)
DNA (2553bp) protein (851aa)
N-acetyl-beta-hexosaminidase Tax=Chthonomonas calidirosea T49 RepID=S0EX73_9BACT
glycoside hydrolase family protein
Glycoside hydrolase family protein {ECO:0000313|EMBL:AIE87425.1}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
anamox2_curated_scaffold_4376_8
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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6507..8105
DNA (1599bp) protein (533aa)
Peptide chain release factor 3 Tax=Symbiobacterium thermophilum RepID=RF3_SYMTH
Peptide chain release factor 3
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
anamox2_curated_scaffold_4376_9
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

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comp(8102..9118)
DNA (1017bp) protein (339aa)
anmK_murQ; anhydro-N-acetylmuramic acid kinase/N-acetylmuramic acid 6-phosphate etherase (EC:2.7.1.170 4.2.1.126)
Anhydro-N-acetylmuramic acid kinase/N-acetylmuramic acid 6-phosphate etherase {ECO:0000313|EMBL:BAM04499.1}; EC=2.7.1.170 {ECO:0000313|EMBL:BAM04499.1};; EC=4.2.1.126 {ECO:0000313|EMBL:BAM04499.1};; species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
Anhydro-N-acetylmuramic acid kinase/N-acetylmuramic acid 6-phosphate etherase Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IGW1_PHYMF
anamox2_curated_scaffold_4376_10
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(9160..10548)
DNA (1389bp) protein (463aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
3-isopropylmalate dehydratase large subunit Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R0H1_ISOPI
3-isopropylmalate dehydratase large subunit
anamox2_curated_scaffold_4376_11
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

10594..11634
DNA (1041bp) protein (347aa)
mrP protein
MrP protein {ECO:0000313|EMBL:AIE86198.1}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
Protein mrp homolog bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
anamox2_curated_scaffold_4376_12
unknown

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comp(11612..12076)
DNA (465bp) protein (155aa)

This feature has no annotations

anamox2_curated_scaffold_4376_13
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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comp(12161..14410)
DNA (2250bp) protein (750aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
DNA-directed RNA polymerase subunit beta' Tax=Chthonomonas calidirosea T49 RepID=S0EX29_9BACT
DNA-directed RNA polymerase subunit beta'
Displaying 13 items

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