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anamox2_curated_scaffold_335

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox2_curated_scaffold_335_1
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64..375
DNA (312bp) protein (104aa)
UPI0003CE4AF3 related cluster Tax=unknown RepID=UPI0003CE4AF3
Uncharacterized protein {ECO:0000313|EMBL:EXL09977.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
Protein of unknown function (DUF2853)
anamox2_curated_scaffold_335_2
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(446..2053)
DNA (1608bp) protein (536aa)
gamma-glutamyltransferase (EC:2.3.2.2)
Putative gamma-glutamyltranspeptidase Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YLD2_MOBAS
Gamma-glutamyltransferase {ECO:0000313|EMBL:ETW94495.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
anamox2_curated_scaffold_335_3

Not on your lists

comp(2074..3024)
DNA (951bp) protein (317aa)
Lipase/esterase Tax=uncultured bacterium RepID=Q3YMN0_9BACT
Lipase/esterase {ECO:0000313|EMBL:AAZ32717.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
alpha/beta hydrolase fold-containing protein
anamox2_curated_scaffold_335_4
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3115..3936)
DNA (822bp) protein (274aa)
Uncharacterized protein Tax=Pseudomonas sp. CMAA1215 RepID=U6ZP04_9PSED
3-hydroxyacyl-CoA dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_335_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4237..5376
DNA (1140bp) protein (380aa)
Acyl-CoA dehydrogenase domain protein Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VM31_RHOPX
acyl-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ADU45764.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
anamox2_curated_scaffold_335_6
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5379..6581
DNA (1203bp) protein (401aa)
acyl-CoA dehydrogenase (EC:1.3.99.3)
acyl-CoA dehydrogenase Tax=Rhodopseudomonas sp. B29 RepID=UPI00034723BA
Bradyrhizobium elkanii strain UASWS1015 Contig173, whole genome shotgun sequence {ECO:0000313|EMBL:KIU49507.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
anamox2_curated_scaffold_335_7
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6648..8180)
DNA (1533bp) protein (511aa)
Uncharacterized protein Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SFR2_METPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM94401.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
anamox2_curated_scaffold_335_8
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8177..9439)
DNA (1263bp) protein (421aa)
Uncharacterized protein Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SFR3_METPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM94402.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
anamox2_curated_scaffold_335_9
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9637..10419
DNA (783bp) protein (261aa)
Hydroxypyruvate isomerase {ECO:0000256|PIRNR:PIRNR006241}; EC=5.3.1.22 {ECO:0000256|PIRNR:PIRNR006241};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia multivorans CGD1.;"
hydroxypyruvate isomerase (EC:5.3.1.22)
Hydroxypyruvate isomerase Tax=Burkholderia multivorans RepID=B9AY83_9BURK
anamox2_curated_scaffold_335_10
Pandoraea vervacti, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10547..11455
DNA (909bp) protein (303aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea vervacti.;"
phosphoribosylaminoimidazole-succinocarboxamide synthase Tax=Herbaspirillum sp. JC206 RepID=UPI0002D2E722
anamox2_curated_scaffold_335_11
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11574..12071
DNA (498bp) protein (166aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum K60-1.;"
N5-carboxyaminoimidazole ribonucleotide mutase Tax=Ralstonia solanacearum (strain Po82) RepID=F6G547_RALS8
purE; phosphoribosylaminoimidazole carboxylase catalytic subunit protein
anamox2_curated_scaffold_335_12
Bordetella parapertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12176..13366
DNA (1191bp) protein (397aa)
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; EC=6.3.4.18 {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; 5-(carboxyamino)imidazole ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella parapertussis (strain Bpp5).;"
Phosphoribosylaminoimidazole carboxylase ATPase subunit Tax=Bordetella parapertussis (strain Bpp5) RepID=K0MGY1_BORPB
purK; phosphoribosylaminoimidazole carboxylase ATPase subunit
anamox2_curated_scaffold_335_13
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13375..14415
DNA (1041bp) protein (347aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei (Pseudomonas pseudomallei).;"
Sua5/YciO/YrdC/YwlC family protein Tax=Burkholderia pseudomallei RepID=A3N6C0_BURP6
tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family
anamox2_curated_scaffold_335_14
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14466..15254
DNA (789bp) protein (263aa)
aroK; anaerobic benzoate catabolism transcriptional regulator (EC:2.7.1.71)
Shikimate kinase Tax=Thauera phenylacetica B4P RepID=N6YT81_9RHOO
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
anamox2_curated_scaffold_335_15
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15362..15820
DNA (459bp) protein (153aa)
Acyl dehydratase {ECO:0000313|EMBL:CDS51206.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
MaoC-like protein dehydratase bin=GWF1_Burkholderiales_GWF1_66_17 species=Hylemonella gracilis genus=Hylemonella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
MaoC-like protein dehydratase
anamox2_curated_scaffold_335_16
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15858..17090
DNA (1233bp) protein (411aa)
hypothetical protein Tax=Roseomonas sp. B5 RepID=UPI000363B691
Arabinose ABC transporter permease {ECO:0000313|EMBL:KJC53402.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
arabinose ABC transporter permease
anamox2_curated_scaffold_335_17
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17098..18312)
DNA (1215bp) protein (405aa)
Glutaryl-CoA dehydrogenase {ECO:0000313|EMBL:CCN22194.1}; EC=1.3.99.7 {ECO:0000313|EMBL:CCN22194.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 1289.;"
acyl-CoA dehydrogenase Tax=Bordetella sp. FB-8 RepID=UPI00036D92DB
gcdH; glutaryl-CoA dehydrogenase
anamox2_curated_scaffold_335_18
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18489..19040
DNA (552bp) protein (184aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10); (Rhodothermus obamensis).;"
Peptide methionine sulfoxide reductase MsrA Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MGP3_RHOM4
peptide methionine sulfoxide reductase
anamox2_curated_scaffold_335_19
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19118..19726
DNA (609bp) protein (203aa)
LemA family protein Tax=Lautropia mirabilis ATCC 51599 RepID=E7RTL1_9BURK
LemA family protein {ECO:0000313|EMBL:EFV96097.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
hypothetical protein
anamox2_curated_scaffold_335_20
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19862..20737
DNA (876bp) protein (292aa)
Putative uncharacterized protein Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CS16_SIDLE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE11752.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans lithotrophicus (strain ES-1).;"
anamox2_curated_scaffold_335_21
Candidatus Accumulibacter sp. SK-12, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20737..21240
DNA (504bp) protein (168aa)
hypothetical protein Tax=Thiobacillus thioparus RepID=UPI0003755BCE
Uncharacterized protein {ECO:0000313|EMBL:EXI69315.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-12.;"
hypothetical protein
anamox2_curated_scaffold_335_22
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21240..22052
DNA (813bp) protein (271aa)
Uncharacterized protein Tax=Lautropia mirabilis ATCC 51599 RepID=E7RTL4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EFV96100.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
hypothetical protein
anamox2_curated_scaffold_335_23
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22058..22714
DNA (657bp) protein (219aa)
Uncharacterized protein Tax=Ralstonia pickettii DTP0602 RepID=U3QSW7_RALPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGW92316.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
anamox2_curated_scaffold_335_24
Saccharomonospora glauca, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22743..23834
DNA (1092bp) protein (364aa)
Isopropylmalate/homocitrate/citramalate synthase Tax=Saccharomonospora glauca K62 RepID=I1D2W5_9PSEU
Isopropylmalate/homocitrate/citramalate synthase {ECO:0000313|EMBL:EIE99289.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora glauca K62.;"
4-hydroxy-2-ketovalerate aldolase
anamox2_curated_scaffold_335_25
marine actinobacterium MedAcidi-G3, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23889..25523
DNA (1635bp) protein (545aa)
Carboxyl transferase Tax=Frankia sp. (strain EuI1c) RepID=E3J922_FRASU
Acetyl-CoA carboxylase {ECO:0000313|EMBL:KIE52864.1}; species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G3.;"
carboxyl transferase
anamox2_curated_scaffold_335_26
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

25511..27499
DNA (1989bp) protein (663aa)
methylcrotonoyl-CoA carboxylase (EC:6.4.1.4)
Methylcrotonoyl-CoA carboxylase bin=GWF2_Methylomirabilis_70_14 species=Pseudonocardia dioxanivorans genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
anamox2_curated_scaffold_335_27
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27590..29371)
DNA (1782bp) protein (594aa)
glutaminyl-tRNA synthetase Tax=Methyloversatilis universalis RepID=UPI0003658FEF
glutaminyl-tRNA synthetase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
anamox2_curated_scaffold_335_28
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29430..29783)
DNA (354bp) protein (118aa)
peptidyl-prolyl isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;"
peptidyl-prolyl cis-trans isomerase Tax=Nevskia ramosa RepID=UPI0003B798B5
anamox2_curated_scaffold_335_29
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29880..30785)
DNA (906bp) protein (302aa)
garR; 2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60)
2-hydroxy-3-oxopropionate reductase GarR {ECO:0000313|EMBL:BAL93421.1}; EC=1.1.1.60 {ECO:0000313|EMBL:BAL93421.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
2-hydroxy-3-oxopropionate reductase GarR Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HK84_RUBGI
anamox2_curated_scaffold_335_30
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30813..32327)
DNA (1515bp) protein (505aa)
hypothetical protein Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI00035E05D0
Uncharacterized protein {ECO:0000313|EMBL:ESJ25726.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
hypothetical protein
Displaying items 1-30 of 47 in total

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