ggKbase home page

anamox2_curated_scaffold_865

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox2_curated_scaffold_865_1
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

3..1691
DNA (1689bp) protein (563aa)
Tax=RBG_16_Chloroflexi_56_8_curated
anamox2_curated_scaffold_865_2

Not on your lists

1736..2710
DNA (975bp) protein (325aa)
Putative uncharacterized protein Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N433_ANATU
Marine sediment metagenome DNA, contig: S12H4_L00306 {ECO:0000313|EMBL:GAI87621.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
anamox2_curated_scaffold_865_3
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2734..3129
DNA (396bp) protein (132aa)
pyridoxamine 5''''-phosphate oxidase Tax=Ruania albidiflava RepID=UPI0003B2EB3D
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein {ECO:0000313|EMBL:EFC85528.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
pyridoxamine 5'-phosphate oxidase-like protein
anamox2_curated_scaffold_865_4
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(3145..4341)
DNA (1197bp) protein (399aa)
Uncharacterized protein Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B4V7_HERA2
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
anamox2_curated_scaffold_865_5
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

4409..4753
DNA (345bp) protein (115aa)
anti-anti-sigma regulatory factor, SpoIIAA; K06378 stage II sporulation protein AA (anti-sigma F factor antagonist) bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
anti-sigma-factor antagonist
Tax=RBG_16_Chloroflexi_63_12_curated
anamox2_curated_scaffold_865_6
RBG_19FT_COMBO_Chloroflexi_47_9_curated, Chloroflexi, Bacteria

Not on your lists

4835..5284
DNA (450bp) protein (150aa)
Putative anti-sigma factor Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N0M1_ANATU
putative anti-sigma factor
Tax=RBG_19FT_COMBO_Chloroflexi_47_9_curated
anamox2_curated_scaffold_865_7
Thermobifida fusca, Thermobifida, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5294..5650
DNA (357bp) protein (119aa)
hypothetical protein Tax=Anaeromusa acidaminophila RepID=UPI000361A269
anti-sigma factor antagonist
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain YX).;"
anamox2_curated_scaffold_865_8
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

5710..8736
DNA (3027bp) protein (1009aa)
Putative uncharacterized protein bin=GWC2_Chloroflexi_49_37 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
stage II sporulation E family protein
Tax=RBG_16_Chloroflexi_57_11_curated
anamox2_curated_scaffold_865_9
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

8910..10178
DNA (1269bp) protein (423aa)
Beta-lactamase class A-like Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B8C2_HERA2
Uncharacterized protein {ECO:0000313|EMBL:KIJ84665.1}; species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
beta-lactamase class A-like protein
anamox2_curated_scaffold_865_10
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

10269..11261
DNA (993bp) protein (331aa)
Tax=RBG_16_Chloroflexi_54_18_curated
anamox2_curated_scaffold_865_11
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

11349..11783
DNA (435bp) protein (145aa)
Putative uncharacterized protein bin=GWB2_Chloroflexi_54_36 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
hypothetical protein
Tax=CG_Arma_01
anamox2_curated_scaffold_865_12
Spirochaeta sp. JC202, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

11780..13531
DNA (1752bp) protein (584aa)
Isocitrate dehydrogenase kinase/phosphatase Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I7F7_CALAS
Uncharacterized protein {ECO:0000313|EMBL:KGM44157.1}; species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC202.;"
aceK; isocitrate dehydrogenase kinase/phosphatase
anamox2_curated_scaffold_865_13
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13528..14271
DNA (744bp) protein (248aa)
hypothetical protein Tax=Leucobacter sp. UCD-THU RepID=UPI000381297B
Phosphorylase family {ECO:0000313|EMBL:EFC94886.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
uridine phosphorylase
anamox2_curated_scaffold_865_14
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

Not on your lists

14256..15050
DNA (795bp) protein (265aa)
Acyl-CoA N-acyltransferases bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
N-acetyltransferase GCN5
Tax=RBG_16_Chloroflexi_64_43_curated
anamox2_curated_scaffold_865_15

Not on your lists

15267..15482
DNA (216bp) protein (72aa)
Cold-shock DNA-binding domain protein Tax=uncultured prokaryote RepID=H5SCL2_9ZZZZ
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:BAL53898.1}; species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
DNA-binding cold-shock protein
anamox2_curated_scaffold_865_16
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

15638..16018
DNA (381bp) protein (127aa)
Two component transcriptional regulator, winged helix family Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CC26_THET1
two component transcriptional regulator, winged helix family
Tax=RBG_16_Chloroflexi_63_12_curated
anamox2_curated_scaffold_865_17
Chloroherpeton thalassium, Chloroherpeton, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(16033..17211)
DNA (1179bp) protein (393aa)
Geranylgeranyl reductase Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QWR4_CHLT3
geranylgeranyl reductase
Geranylgeranyl reductase {ECO:0000313|EMBL:ACF13278.1}; Flags: Precursor;; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chloroherpeton.;" source="Chloroherpeton thalassium (strain ATCC 35110 / GB-78).;"
anamox2_curated_scaffold_865_18
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17315..17782)
DNA (468bp) protein (156aa)
Protein tyrosine phosphatase Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WTL0_KYRT2
protein tyrosine phosphatase
Protein tyrosine phosphatase {ECO:0000313|EMBL:ADG07246.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Kyrpidia.;" source="Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) (Bacillus; tusciae).;"
anamox2_curated_scaffold_865_19
unknown

Not on your lists

18371..18973
DNA (603bp) protein (201aa)

This feature has no annotations

anamox2_curated_scaffold_865_20
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(18979..21783)
DNA (2805bp) protein (935aa)
polA; DNA polymerase I (EC:2.7.7.7)
DNA polymerase I Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N2R0_ANATU
Tax=RBG_13_Chloroflexi_68_17_curated
anamox2_curated_scaffold_865_21
unknown

Not on your lists

comp(21924..22322)
DNA (399bp) protein (133aa)

This feature has no annotations

anamox2_curated_scaffold_865_22
Saccharothrix sp. ST-888, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22544..24532)
DNA (1989bp) protein (663aa)
Uncharacterized protein Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4N987_KITSK
Endonuclease {ECO:0000313|EMBL:KJK55515.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;"
hypothetical protein
anamox2_curated_scaffold_865_23
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(24708..25076)
DNA (369bp) protein (123aa)
Uncharacterized protein Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PXZ8_9BACT
response regulator receiver protein
Tax=RBG_16_Chloroflexi_51_9_curated
anamox2_curated_scaffold_865_24
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(25150..28752)
DNA (3603bp) protein (1201aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
Multi-sensor signal transduction histidine kinase Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B1I0_HERA2
multi-sensor signal transduction histidine kinase
Displaying 24 items

View Taxonomy