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anamox2_curated_scaffold_955

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox2_curated_scaffold_955_1
Geoalkalibacter subterraneus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..875
DNA (873bp) protein (291aa)
Integron integrase subfamily Tax=Synechococcus sp. PCC 7335 RepID=B4WQS1_9SYNE
integrase
Integrase {ECO:0000313|EMBL:AJF06303.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter subterraneus.;"
anamox2_curated_scaffold_955_2
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(1285..2409)
DNA (1125bp) protein (375aa)
Two-component hybrid sensor and regulator bin=GWC2_Ignavibacteria_56_12 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
two-component hybrid sensor and regulator
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
anamox2_curated_scaffold_955_3
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(2423..5380)
DNA (2958bp) protein (986aa)
Multi-sensor hybrid histidine kinase bin=GWA2_Ignavibacteria_55_11 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
multi-sensor hybrid histidine kinase
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
anamox2_curated_scaffold_955_4
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(5410..5895)
DNA (486bp) protein (162aa)
Response regulator receiver protein bin=GWA2_Ignavibacteria_55_11 species=Starkeya novella genus=Starkeya taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
response regulator receiver protein
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
anamox2_curated_scaffold_955_5
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(5931..9353)
DNA (3423bp) protein (1141aa)
5'-nucleotidase domain-containing protein bin=GWA2_Ignavibacteria_55_11 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
anamox2_curated_scaffold_955_6
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(9456..12359)
DNA (2904bp) protein (968aa)
hypothetical protein Tax=Cloacimonetes bacterium SCGC AAA252-N05 RepID=UPI000367CDB3
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
anamox2_curated_scaffold_955_7
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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12669..13085
DNA (417bp) protein (139aa)
Single-stranded DNA-binding protein bin=GWA2_Ignavibacteria_55_11 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
single-stranded DNA-binding protein
Tax=GWA2_Ignavibacteria_54_16_curated
anamox2_curated_scaffold_955_8
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

13155..14846
DNA (1692bp) protein (564aa)
ial:IALB_1552 ggt; gamma-glutamyltransferase; K00681 gamma-glutamyltranspeptidase [EC:2.3.2.2] bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
gamma-glutamyltransferase
Tax=GWA2_Ignavibacteria_54_16_curated
anamox2_curated_scaffold_955_9
unknown

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15001..15963
DNA (963bp) protein (321aa)

This feature has no annotations

anamox2_curated_scaffold_955_10
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

16344..17204
DNA (861bp) protein (287aa)
Putative uncharacterized protein bin=GWA2_Ignavibacteria_55_11 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
anamox2_curated_scaffold_955_11
RBG_13_RIF_OD1_08_40_8_curated, RIF-OD1-8, Parcubacteria, Bacteria

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17280..17570
DNA (291bp) protein (97aa)
Endo/excinuclease amino terminal domain protein bin=GWC1_CPR2_39_9 species=Leptolyngbya sp. PCC 6406 genus=Leptolyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
Excinuclease ABC, C subunit domain protein
Tax=RBG_13_RIF_OD1_08_40_8_curated
anamox2_curated_scaffold_955_12
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

17626..18714
DNA (1089bp) protein (363aa)
Peptide chain release factor 1 bin=GWC2_Ignavibacteria_56_12 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
peptide chain release factor 1
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
anamox2_curated_scaffold_955_13
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(18754..19227)
DNA (474bp) protein (158aa)
hypothetical protein Tax=Balneola vulgaris RepID=UPI000370859A
CMP/dCMP deaminase zinc-binding protein
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
anamox2_curated_scaffold_955_14
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(19224..19790)
DNA (567bp) protein (189aa)
Putative uncharacterized protein bin=GWA2_Ignavibacteria_55_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
anamox2_curated_scaffold_955_15
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(19827..21053)
DNA (1227bp) protein (409aa)
Mannose-6-phosphate isomerase bin=GWF2_Ignavibacteria_35_20 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
phosphomannose isomerase type I
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
anamox2_curated_scaffold_955_trna_1
unknown

Not on your lists

comp(21162..21235)
DNA (74bp)
transferRNA Arg
anamox2_curated_scaffold_955_16
Mariniradius saccharolyticus, Mariniradius, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21565..22665)
DNA (1101bp) protein (367aa)
Uncharacterized protein Tax=Mariniradius saccharolyticus AK6 RepID=M7X8J9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EMS33725.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Mariniradius.;" source="Mariniradius saccharolyticus AK6.;"
hypothetical protein
anamox2_curated_scaffold_955_17
GWA2_OP3_52_8_curated, Omnitrophica, Bacteria

Not on your lists

comp(22727..23647)
DNA (921bp) protein (307aa)
hypothetical protein Tax=Gracilimonas tropica RepID=UPI00037A92D2
nucleoside-diphosphate sugar epimerase
Tax=GWA2_OP3_52_8_curated
anamox2_curated_scaffold_955_18
RBG_19FT_COMBO_Deltaproteobacteria_43_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23644..26631)
DNA (2988bp) protein (996aa)
PAS/PAC sensor hybrid histidine kinase Tax=Caldithrix abyssi DSM 13497 RepID=H1XXQ7_9BACT
multi-sensor hybrid histidine kinase
Tax=RBG_19FT_COMBO_Deltaproteobacteria_43_11_curated
Displaying 19 items

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