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anamox2_curated_scaffold_1170

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox2_curated_scaffold_1170_1
unknown

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comp(3..68)
DNA (66bp) protein (22aa)

This feature has no annotations

anamox2_curated_scaffold_1170_2
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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393..2129
DNA (1737bp) protein (579aa)
hypothetical protein Tax=Gracilimonas tropica RepID=UPI0003803BF5
Uncharacterized protein {ECO:0000313|EMBL:KIA96715.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
hypothetical protein
anamox2_curated_scaffold_1170_3
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2202..3344)
DNA (1143bp) protein (381aa)
hypothetical protein Tax=Pontibacter roseus RepID=UPI0003719C09
Uncharacterized protein {ECO:0000313|EMBL:ETZ20640.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
beta-lactamase
anamox2_curated_scaffold_1170_4
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3608..4255
DNA (648bp) protein (216aa)
Putative phosphate transport regulator Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMT8_NIAKG
Phosphate transport regulator {ECO:0000313|EMBL:KIC94553.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
putative phosphate transport regulator
anamox2_curated_scaffold_1170_5
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

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4280..5503
DNA (1224bp) protein (408aa)
Phosphate transporter bin=GWF2_Bacteroidetes_38_335 species=unknown genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
phosphate transporter
Tax=GWF2_Bacteroidetes_38_335_curated
anamox2_curated_scaffold_1170_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5556..6611
DNA (1056bp) protein (352aa)
UDP-galactose 4-epimerase {ECO:0000313|EMBL:AEW03106.1}; EC=5.1.3.2 {ECO:0000313|EMBL:AEW03106.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
UDP-galactose 4-epimerase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMT5_NIAKG
UDP-galactose 4-epimerase
anamox2_curated_scaffold_1170_7
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6788..7750
DNA (963bp) protein (321aa)
1-deoxy-D-xylulose-5-phosphate synthase Tax=Niabella soli DSM 19437 RepID=H1NUF4_9SPHI
transketolase
Transketolase {ECO:0000313|EMBL:AHF15718.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox2_curated_scaffold_1170_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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7872..8429
DNA (558bp) protein (186aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMT1_NIAKG
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEW03102.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox2_curated_scaffold_1170_9
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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8467..9249
DNA (783bp) protein (261aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC94557.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
anamox2_curated_scaffold_1170_10
unknown

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9293..9679
DNA (387bp) protein (129aa)

This feature has no annotations

anamox2_curated_scaffold_1170_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(9785..10522)
DNA (738bp) protein (246aa)
Beta-lactamase domain protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMS8_NIAKG
beta-lactamase
Beta-lactamase domain protein {ECO:0000313|EMBL:AEW03099.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox2_curated_scaffold_1170_12
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10567..11901)
DNA (1335bp) protein (445aa)
Cell cycle protein Tax=Niabella soli DSM 19437 RepID=H1NUE9_9SPHI
Cell cycle protein {ECO:0000313|EMBL:KIC94559.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
cell cycle protein
anamox2_curated_scaffold_1170_13
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11916..14015)
DNA (2100bp) protein (700aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036078A2
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:KIC94560.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
peptidoglycan glycosyltransferase
anamox2_curated_scaffold_1170_14
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14135..14659)
DNA (525bp) protein (175aa)
rod shape-determining protein MreD Tax=Niabella aurantiaca RepID=UPI00037499AC
rod shape-determining protein MreD
Rod shape-determining protein MreD {ECO:0000313|EMBL:AHF15716.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox2_curated_scaffold_1170_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14665..15543)
DNA (879bp) protein (293aa)
Cell shape-determining protein MreC Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMS4_NIAKG
rod shape-determining protein MreC
Rod shape-determining protein MreC {ECO:0000313|EMBL:AEW03095.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox2_curated_scaffold_1170_16
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15616..16740)
DNA (1125bp) protein (375aa)
cell shape-determining protein MreB Tax=Niabella aurantiaca RepID=UPI00036A5CF5
cell shape-determining protein MreB
Cell shape-determining protein MreB {ECO:0000313|EMBL:AHF15717.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox2_curated_scaffold_1170_17
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16775..17929
DNA (1155bp) protein (385aa)
Putative uncharacterized protein bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
sugar phosphate permease
Tax=GWA2_Bacteroidetes_32_17_curated
anamox2_curated_scaffold_1170_18
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18029..18496
DNA (468bp) protein (156aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036CDDC7
Uncharacterized protein {ECO:0000313|EMBL:KIC89933.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
anamox2_curated_scaffold_1170_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18600..19898)
DNA (1299bp) protein (433aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
phosphoribosylamine--glycine ligase Tax=Niabella aurantiaca RepID=UPI000368110D
phosphoribosylamine--glycine ligase
anamox2_curated_scaffold_1170_20
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20042..21697
DNA (1656bp) protein (552aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI00036CAEE8
amino acid/peptide transporter
Amino acid/peptide transporter {ECO:0000313|EMBL:ACU57697.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
anamox2_curated_scaffold_1170_21
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21780..23333
DNA (1554bp) protein (518aa)
Oligopeptide transporter, OPT family Tax=Niabella soli DSM 19437 RepID=H1NPZ9_9SPHI
peptide transporter
Peptide transporter {ECO:0000313|EMBL:AHF15832.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Displaying 21 items

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