ggKbase home page

anamox2_curated_scaffold_537

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox2_curated_scaffold_537_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1..1857
DNA (1857bp) protein (619aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCY5_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97194.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox2_curated_scaffold_537_2
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1867..2538
DNA (672bp) protein (224aa)
Virulence factor family protein Tax=Niabella soli DSM 19437 RepID=H1NPB9_9SPHI
virulence factor
Virulence factor {ECO:0000313|EMBL:AHF15049.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox2_curated_scaffold_537_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2751..5252
DNA (2502bp) protein (834aa)
ATPase, P-type (Transporting), HAD superfamily, subfamily IC {ECO:0000313|EMBL:AEV98248.1}; EC=3.6.3.8 {ECO:0000313|EMBL:AEV98248.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
ATPase, P-type (Transporting), HAD superfamily, subfamily IC Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TD16_NIAKG
P-type HAD superfamily ATPase
anamox2_curated_scaffold_537_4
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5383..5829
DNA (447bp) protein (149aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037BB02B
Heat-shock protein Hsp20 {ECO:0000313|EMBL:KIC90838.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
heat shock protein Hsp20
anamox2_curated_scaffold_537_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6134..6535
DNA (402bp) protein (134aa)
Uncharacterized protein Tax=Niabella soli DSM 19437 RepID=H1NNE1_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17528.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox2_curated_scaffold_537_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6547..8112
DNA (1566bp) protein (522aa)
ErfK/YbiS/YcfS/YnhG family protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TD28_NIAKG
ErfK/YbiS/YcfS/YnhG family protein
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:AEV98260.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox2_curated_scaffold_537_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8210..8869
DNA (660bp) protein (220aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGY6_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV99588.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox2_curated_scaffold_537_8
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8953..10011)
DNA (1059bp) protein (353aa)
Transcriptional regulator, Crp/Fnr family Tax=Niabella soli DSM 19437 RepID=H1NNE3_9SPHI
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AHF15300.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox2_curated_scaffold_537_9
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10063..11301)
DNA (1239bp) protein (413aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
PAS/PAC sensor signal transduction histidine kinase Tax=Niabella soli DSM 19437 RepID=H1NNE4_9SPHI
histidine kinase
anamox2_curated_scaffold_537_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11557..12384
DNA (828bp) protein (276aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TD31_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98263.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox2_curated_scaffold_537_11
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12416..14197)
DNA (1782bp) protein (594aa)
Glycoside hydrolase Tax=Microscilla marina ATCC 23134 RepID=A1ZY74_9BACT
Glycoside hydrolase {ECO:0000313|EMBL:EAY24640.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
glycosyl hydrolase
anamox2_curated_scaffold_537_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14203..14973)
DNA (771bp) protein (257aa)
Trehalose 6-phosphatase, trehalose 6-phosphate synthase {ECO:0000313|EMBL:AEV98552.1}; EC=2.4.1.15 {ECO:0000313|EMBL:AEV98552.1};; EC=3.1.3.12 {ECO:0000313|EMBL:AEV98552.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003681F25
trehalose 6-phosphatase, trehalose 6-phosphate synthase
anamox2_curated_scaffold_537_13
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15421..16809)
DNA (1389bp) protein (463aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
Integral membrane sensor signal transduction histidine kinase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNW9_NIAKG
integral membrane sensor signal transduction histidine kinase
anamox2_curated_scaffold_537_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16809..17498)
DNA (690bp) protein (230aa)
Two component transcriptional regulator, winged helix family Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNX0_NIAKG
two component transcriptional regulator, winged helix family
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AEW02055.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox2_curated_scaffold_537_15
unknown

Not on your lists

comp(17592..17792)
DNA (201bp) protein (67aa)

This feature has no annotations

anamox2_curated_scaffold_537_16
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17803..19455)
DNA (1653bp) protein (551aa)
SSS sodium solute transporter superfamily Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCP9_NIAKG
Na+/galactose cotransporter {ECO:0000313|EMBL:KIA94410.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
SSS sodium solute transporter superfamily protein
anamox2_curated_scaffold_537_17
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19472..22945)
DNA (3474bp) protein (1158aa)
Arabinogalactan endo-beta-1,4-galactanase {ECO:0000256|RuleBase:RU361192}; EC=3.2.1.89 {ECO:0000256|RuleBase:RU361192};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
Beta-galactosidase., Arabinogalactan endo-1,4-beta-galactosidase Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L018_HALH1
beta-galactosidase
anamox2_curated_scaffold_537_18
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22996..23880)
DNA (885bp) protein (295aa)
Arabinogalactan endo-beta-1,4-galactanase {ECO:0000256|RuleBase:RU361192}; EC=3.2.1.89 {ECO:0000256|RuleBase:RU361192};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
arabinogalactan endo-1,4-beta-galactosidase (EC:3.2.1.89)
Glycosyl hydrolase 53 domain protein Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YBD3_9SPHI
anamox2_curated_scaffold_537_19
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24125..26239)
DNA (2115bp) protein (705aa)
Uncharacterized protein Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L020_HALH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIC95216.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
anamox2_curated_scaffold_537_20
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26260..27102)
DNA (843bp) protein (281aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC95215.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
anamox2_curated_scaffold_537_21
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27121..28731)
DNA (1611bp) protein (537aa)
RagB/SusD domain-containing protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T781_NIAKG
RagB/SusD domain-containing protein
RagB/SusD domain-containing protein {ECO:0000313|EMBL:AEW00106.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox2_curated_scaffold_537_22
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28760..31873)
DNA (3114bp) protein (1038aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI000361AD5F
TonB-dependent receptor plug {ECO:0000313|EMBL:ADY53695.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
TonB-dependent receptor plug
anamox2_curated_scaffold_537_23
Flavobacterium sp. EM1321, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32047..33072)
DNA (1026bp) protein (342aa)
Transcriptional regulator, LacI family Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRR8_CHIPD
LacI family transcriptional regulator {ECO:0000313|EMBL:KDN55858.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1321.;"
LacI family transcriptional regulator
anamox2_curated_scaffold_537_24
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33205..33942)
DNA (738bp) protein (246aa)
NUDIX hydrolase Tax=Niabella soli DSM 19437 RepID=H1NQX2_9SPHI
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:AEW02270.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox2_curated_scaffold_537_25
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33962..36886)
DNA (2925bp) protein (975aa)
Uncharacterized protein Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GY08_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KIC91233.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
glycoside hydrolase family protein
anamox2_curated_scaffold_537_26
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

37037..37627
DNA (591bp) protein (197aa)
Uncharacterized protein Tax=Halogranum salarium B-1 RepID=J3JHD5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN60891.1}; species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
phosphinothricin acetyltransferase
anamox2_curated_scaffold_537_27

Not on your lists

comp(37708..38562)
DNA (855bp) protein (285aa)
Aspartate transaminase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP79_NIAKG
Aminotransferase class I and II {ECO:0000313|EMBL:AIA17286.1}; Flags: Fragment;; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
aspartate transaminase
Displaying 27 items

View Taxonomy