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anamox2_curated_scaffold_1083

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox2_curated_scaffold_1083_1
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1..1299)
DNA (1299bp) protein (433aa)
TonB-dependent receptor plug Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THT3_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC91793.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
TonB-dependent receptor plug
anamox2_curated_scaffold_1083_2
unknown

Not on your lists

1609..1794
DNA (186bp) protein (62aa)

This feature has no annotations

anamox2_curated_scaffold_1083_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1784..2800
DNA (1017bp) protein (339aa)
L-threonine aldolase {ECO:0000313|EMBL:AEV97528.1}; EC=4.1.2.5 {ECO:0000313|EMBL:AEV97528.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
L-threonine aldolase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJ11_NIAKG
L-threonine aldolase
anamox2_curated_scaffold_1083_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2803..4461
DNA (1659bp) protein (553aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Glucose-6-phosphate isomerase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJ10_NIAKG
glucose-6-phosphate isomerase
anamox2_curated_scaffold_1083_5
unknown

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4487..4918
DNA (432bp) protein (144aa)

This feature has no annotations

anamox2_curated_scaffold_1083_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4966..5367)
DNA (402bp) protein (134aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003626095
DNA-binding protein
DNA-binding protein {ECO:0000313|EMBL:AHF14565.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox2_curated_scaffold_1083_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5495..7330)
DNA (1836bp) protein (612aa)
Xenobiotic-transporting ATPase {ECO:0000313|EMBL:AEV99986.1}; EC=3.6.3.44 {ECO:0000313|EMBL:AEV99986.1};; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Xenobiotic-transporting ATPase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPZ2_NIAKG
xenobiotic-transporting ATPase
anamox2_curated_scaffold_1083_trna_2
unknown

Not on your lists

comp(7465..7551)
DNA (87bp)
transferRNA Ser
anamox2_curated_scaffold_1083_trna_1
unknown

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comp(7673..7757)
DNA (85bp)
transferRNA Ser
anamox2_curated_scaffold_1083_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7807..8832)
DNA (1026bp) protein (342aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000382A239
LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:AEW01860.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox2_curated_scaffold_1083_9
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9065..9499
DNA (435bp) protein (145aa)
histidine kinase Tax=Niabella aurantiaca RepID=UPI0003718FB3
histidine kinase
Histidine kinase {ECO:0000313|EMBL:AHF14078.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox2_curated_scaffold_1083_10
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9672..10232
DNA (561bp) protein (187aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Peptide methionine sulfoxide reductase MsrA Tax=Niabella soli DSM 19437 RepID=H1NK33_9SPHI
peptide methionine sulfoxide reductase
anamox2_curated_scaffold_1083_11
unknown

Not on your lists

comp(10281..10400)
DNA (120bp) protein (40aa)

This feature has no annotations

anamox2_curated_scaffold_1083_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10366..10989)
DNA (624bp) protein (208aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037CD021
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03523.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox2_curated_scaffold_1083_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11001..11630)
DNA (630bp) protein (210aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000366615C
lipoprotein
Lipoprotein {ECO:0000313|EMBL:AEW03522.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox2_curated_scaffold_1083_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

12508..14412
DNA (1905bp) protein (635aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000374BB60
ABC transporter
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
anamox2_curated_scaffold_1083_15
Candidatus Actinomarina minuta, Candidatus Actinomarina, Candidatus Actinomarinales, Candidatus Actinomarinidae, Actinobacteria, Bacteria

Not on your lists

14559..15086
DNA (528bp) protein (176aa)
hypothetical protein Tax=actinobacterium SCGC AAA015-D07 RepID=UPI00036B2A67
hypothetical protein
Peroxiredoxin {ECO:0000313|EMBL:AGQ18696.1}; species="Bacteria; Actinobacteria; Candidatus Actinomarinidae; Candidatus Actinomarinales; Candidatus Actinomarineae; Candidatus Actinomarinaceae; Candidatus Actinomarina.;" source="Candidatus Actinomarina minuta.;"
anamox2_curated_scaffold_1083_16
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15212..16642)
DNA (1431bp) protein (477aa)
L-serine dehydratase 1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGH6_NIAKG
Serine dehydratase {ECO:0000313|EMBL:KIC90158.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
L-serine dehydratase 1
anamox2_curated_scaffold_1083_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16712..17206)
DNA (495bp) protein (165aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Peptidyl-prolyl cis-trans isomerase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGH4_NIAKG
FKBP-type peptidylprolyl isomerase
anamox2_curated_scaffold_1083_18
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17252..17572)
DNA (321bp) protein (107aa)
Uncharacterized protein Tax=Niabella soli DSM 19437 RepID=H1NRY0_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17997.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox2_curated_scaffold_1083_19
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17660..18586
DNA (927bp) protein (309aa)
Uncharacterized protein Tax=Niabella soli DSM 19437 RepID=H1NRY1_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KIC90161.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
anamox2_curated_scaffold_1083_20
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18617..20572)
DNA (1956bp) protein (652aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037FC839
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:ACT94526.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
anamox2_curated_scaffold_1083_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(20682..23252)
DNA (2571bp) protein (857aa)
beta-N-acetylhexosaminidase (EC:3.2.1.52)
hypothetical protein Tax=Pedobacter arcticus RepID=UPI00037B322B
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
anamox2_curated_scaffold_1083_22
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23393..24319)
DNA (927bp) protein (309aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00035E6BE5
Putative DMT family transporter {ECO:0000313|EMBL:GAO44707.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
anamox2_curated_scaffold_1083_23
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24316..24957)
DNA (642bp) protein (214aa)
N-acylglucosamine 2-epimerase (EC:5.1.3.8)
N-acylglucosamine 2-epimerase Tax=Flavobacterium frigoris PS1 RepID=H7FLV8_9FLAO
N-acylglucosamine 2-epimerase {ECO:0000313|EMBL:KIA85703.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
Displaying 25 items

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