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anamox2_curated_scaffold_1949

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox2_curated_scaffold_1949_1
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..422
DNA (420bp) protein (140aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00037329F2
Phytoene synthase {ECO:0000313|EMBL:KJV24899.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
anamox2_curated_scaffold_1949_2
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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508..1473
DNA (966bp) protein (322aa)
GTP cyclohydrolase FolE2 {ECO:0000256|HAMAP-Rule:MF_01527}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_01527};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
GTP cyclohydrolase I (EC:3.5.4.16)
Putative uncharacterized protein folE2 (Fragment) bin=GWF1_Xanthomonadales_69_6 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
anamox2_curated_scaffold_1949_3
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1496..1984)
DNA (489bp) protein (163aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI0003713D44
deoxyxylulose-5-phosphate synthase
Tax=RBG_16_Gamma2_60_9_curated
anamox2_curated_scaffold_1949_4
Arundo donax, Arundo, Poales, commelinids, Streptophyta, Viridiplantae

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2622..3083
DNA (462bp) protein (154aa)
Uncharacterized protein Tax=Bacteroides fragilis CAG:558 RepID=R5RYI3_9BACE
Dxs1 {ECO:0000313|EMBL:JAD96385.1}; species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Arundinoideae; Arundineae; Arundo.;" source="Arundo donax (Giant reed) (Donax arundinaceus).;"
anamox2_curated_scaffold_1949_5
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3074..4258
DNA (1185bp) protein (395aa)
hypothetical protein Tax=Acidovorax radicis RepID=UPI0002377F7D
Uncharacterized protein {ECO:0000313|EMBL:KHJ55685.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
hypothetical protein
anamox2_curated_scaffold_1949_6
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4355..6187
DNA (1833bp) protein (611aa)
hypothetical protein Tax=Acidovorax radicis RepID=UPI0002377F7B
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
anamox2_curated_scaffold_1949_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6243..6911)
DNA (669bp) protein (223aa)
Uncharacterized protein Tax=Rhodanobacter denitrificans RepID=I4WWS5_9GAMM
Ion channel
Ion channel {ECO:0000313|EMBL:AGG89533.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
anamox2_curated_scaffold_1949_8
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6946..7236)
DNA (291bp) protein (97aa)
endonuclease Tax=Rudaea cellulosilytica RepID=UPI000368F2DE
HNH endonuclease
HNH endonuclease {ECO:0000313|EMBL:KGI76990.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
anamox2_curated_scaffold_1949_9
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7740..9530)
DNA (1791bp) protein (597aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00036578C7
Uncharacterized protein {ECO:0000313|EMBL:CCP42050.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. translucens DSM 18974.;"
acyl-CoA dehydrogenase
anamox2_curated_scaffold_1949_10
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9701..10144)
DNA (444bp) protein (148aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00037DF531
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
anamox2_curated_scaffold_1949_11
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10585..12057
DNA (1473bp) protein (491aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI000381A487
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:KGI77289.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
ATP-dependent DNA helicase RecQ
anamox2_curated_scaffold_1949_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12168..13595
DNA (1428bp) protein (476aa)
hypothetical protein Tax=Dyella ginsengisoli RepID=UPI000347F91C
outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:AGG88255.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
anamox2_curated_scaffold_1949_13
unknown

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comp(13916..14086)
DNA (171bp) protein (57aa)

This feature has no annotations

anamox2_curated_scaffold_1949_14

Not on your lists

14477..14725
DNA (249bp) protein (83aa)
Membrane protein containing DUF214, permase predicted (Fragment) Tax=mine drainage metagenome RepID=T0Z7L4_9ZZZZ
Membrane protein containing DUF214, permase predicted {ECO:0000313|EMBL:EQD59461.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
membrane protein spanning subunit
anamox2_curated_scaffold_1949_15
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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14731..15447
DNA (717bp) protein (239aa)
ABC transporter ATP-binding protein Tax=Rhodanobacter sp. 115 RepID=I4WHH4_9GAMM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EIL98915.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
ABC-type antimicrobial peptide transport system, ATPase component
anamox2_curated_scaffold_1949_16
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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15444..16334
DNA (891bp) protein (297aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00037C1167
secretion protein HlyD
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
anamox2_curated_scaffold_1949_17
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16452..17153
DNA (702bp) protein (234aa)
phosphatase Tax=Dyella ginsengisoli RepID=UPI0003687D98
Phosphatase {ECO:0000313|EMBL:GAN45759.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
phosphatase
Displaying 17 items

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