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anamox2_curated_scaffold_4163

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox2_curated_scaffold_4163_1

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comp(2..469)
DNA (468bp) protein (156aa)
HflK Tax=mine drainage metagenome RepID=T1AKE6_9ZZZZ
HflK {ECO:0000313|EMBL:EQD61056.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
membrane protein
anamox2_curated_scaffold_4163_2
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(545..1780)
DNA (1236bp) protein (412aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00036DEA46
GTP-binding protein HflX
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
anamox2_curated_scaffold_4163_3
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2149..2424)
DNA (276bp) protein (92aa)
RNA-binding protein Hfq Tax=Stenotrophomonas maltophilia RepID=UPI0003021CF6
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
hfq; RNA-binding protein Hfq
anamox2_curated_scaffold_4163_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2592..3521)
DNA (930bp) protein (310aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
tRNA dimethylallyltransferase Tax=Rhodanobacter denitrificans RepID=I4WV79_9GAMM
tRNA isopentenyltransferase MiaA
anamox2_curated_scaffold_4163_5
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3682..4194)
DNA (513bp) protein (171aa)
response regulator receiver Tax=Arenimonas oryziterrae RepID=UPI0003B4696C
Uncharacterized protein {ECO:0000313|EMBL:KFN48637.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
response regulator receiver
anamox2_curated_scaffold_4163_6

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4364..5398
DNA (1035bp) protein (345aa)
L-threonine 3-dehydrogenase {ECO:0000313|EMBL:EQD62108.1}; EC=1.1.1.103 {ECO:0000313|EMBL:EQD62108.1};; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
L-threonine 3-dehydrogenase Tax=Rudaea cellulosilytica RepID=UPI0003688012
L-threonine 3-dehydrogenase
anamox2_curated_scaffold_4163_7
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5457..6806
DNA (1350bp) protein (450aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI0003648FAD
tRNA(Ile)-lysidine synthetase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
anamox2_curated_scaffold_4163_8

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6840..7100
DNA (261bp) protein (87aa)
Exonuclease VII, small subunit {ECO:0000313|EMBL:EQD26730.1}; EC=3.1.11.6 {ECO:0000313|EMBL:EQD26730.1};; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Exonuclease VII, small subunit Tax=mine drainage metagenome RepID=T0ZAB5_9ZZZZ
exodeoxyribonuclease VII small subunit
anamox2_curated_scaffold_4163_9
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7256..8149
DNA (894bp) protein (298aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI000369EF91
geranyl transferase
Geranyl transferase {ECO:0000313|EMBL:AHX14233.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
anamox2_curated_scaffold_4163_10
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8246..8611)
DNA (366bp) protein (122aa)
Putative uncharacterized protein Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WV56_PSEUU
Orotate phosphoribosyltransferase {ECO:0000313|EMBL:AKC85922.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
hypothetical protein
Displaying 10 items

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