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anamox2_curated_scaffold_5813

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox2_curated_scaffold_5813_1
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..695
DNA (693bp) protein (231aa)
Protein kinase domain-containing protein Tax=Rhodanobacter sp. 115 RepID=I4VNC2_9GAMM
Protein kinase domain-containing protein {ECO:0000313|EMBL:EIL88713.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
protein kinase domain-containing protein
anamox2_curated_scaffold_5813_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

841..1251
DNA (411bp) protein (137aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00037D82AF
Heat shock protein 15 {ECO:0000256|PIRNR:PIRNR016821}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
tRNA synthetase RNA-binding protein
anamox2_curated_scaffold_5813_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1321..3954)
DNA (2634bp) protein (878aa)
DNA mismatch repair protein MutS Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUF4_9GAMM
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
DNA mismatch repair protein MutS
anamox2_curated_scaffold_5813_4
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3968..4225)
DNA (258bp) protein (86aa)
ISxcc1 transposase Tax=Ralstonia solanacearum SD54 RepID=V5A3F2_RALSL
transposase family protein
Mobile element protein {ECO:0000313|EMBL:CDY75429.1}; Transposase {ECO:0000313|EMBL:KDR37516.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
anamox2_curated_scaffold_5813_5
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4556..4876
DNA (321bp) protein (107aa)
Uncharacterized protein {ECO:0000313|EMBL:KGM52341.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
anamox2_curated_scaffold_5813_6
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4988..5206)
DNA (219bp) protein (73aa)
translation initiation factor IF-1 Tax=Arenimonas oryziterrae RepID=UPI0003B5B20C
translation initiation factor 1 (IF-1)
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
anamox2_curated_scaffold_5813_7
Xanthomonas hortorum, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5329..6057)
DNA (729bp) protein (243aa)
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088489}; EC=2.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088482};; L/F-transferase {ECO:0000256|HAMAP-Rule:MF_00688}; Leucyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; Phenyalanyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas hortorum pv. carotae str. M081.;"
Leucyl-phenylalanyl-tRNA-protein transferase Tax=Xanthomonas hortorum pv. carotae str. M081 RepID=V7ZD70_9XANT
leucyl/phenylalanyl-tRNA--protein transferase
anamox2_curated_scaffold_5813_8
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6054..7208)
DNA (1155bp) protein (385aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI000370DD6E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF48305.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
anamox2_curated_scaffold_5813_9
uncultured Thiohalocapsa sp. PB-PSB1, Thiohalocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7215..7769)
DNA (555bp) protein (185aa)
Uncharacterized protein Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4KUU8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ESQ09058.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiohalocapsa; environmental samples.;" source="uncultured Thiohalocapsa sp. PB-PSB1.;"
hypothetical protein
anamox2_curated_scaffold_5813_10
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7778..8596)
DNA (819bp) protein (273aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
thioredoxin reductase Tax=Dyella japonica RepID=UPI0002FFFBAA
thioredoxin reductase
anamox2_curated_scaffold_5813_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8943..10004
DNA (1062bp) protein (354aa)
L-alanine dehydrogenase (EC:1.4.1.1)
Alanine dehydrogenase Tax=Rhodanobacter spathiphylli B39 RepID=I4W730_9GAMM
Alanine dehydrogenase {ECO:0000313|EMBL:EIL95271.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
anamox2_curated_scaffold_5813_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10766..12418
DNA (1653bp) protein (551aa)
DNA segregation ATPase FtsK Tax=Rhodanobacter denitrificans RepID=I4WXA6_9GAMM
DNA segregation ATPase, FtsK/SpoIIIE family
DNA segregation ATPase, FtsK/SpoIIIE family {ECO:0000313|EMBL:AGG89289.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
anamox2_curated_scaffold_5813_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12493..13155
DNA (663bp) protein (221aa)
Lipoprotein chaperone Tax=Rhodanobacter denitrificans RepID=I4WXA7_9GAMM
Outer-membrane lipoprotein carrier protein {ECO:0000256|HAMAP-Rule:MF_00240, ECO:0000256|SAAS:SAAS00028972}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
cell envelope biogenesis protein LolA
anamox2_curated_scaffold_5813_14
unknown

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13253..13474
DNA (222bp) protein (74aa)

This feature has no annotations

anamox2_curated_scaffold_5813_15
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13477..13902
DNA (426bp) protein (142aa)
hypothetical protein Tax=Dyella ginsengisoli RepID=UPI0003453E0C
Uncharacterized protein {ECO:0000313|EMBL:KFN41195.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
hypothetical protein
anamox2_curated_scaffold_5813_16
Xanthomonas gardneri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13989..14345
DNA (357bp) protein (119aa)
Putative Oxidoreductase with FAD/NAD(P)-binding domain Tax=Candidatus Nitrospira defluvii RepID=D8PJ60_9BACT
putative oxidoreductase
Putative flavoprotein {ECO:0000313|EMBL:EGD18896.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas gardneri ATCC 19865.;"
Displaying 16 items

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