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anamox3_curated_scaffold_2035

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox3_curated_scaffold_2035_1
Vibrio vulnificus, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..1554
DNA (1554bp) protein (518aa)
Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing Tax=Vibrio vulnificus (strain MO6-24/O) RepID=E8VVH7_VIBVM
D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing
Fe-S oxidoreductase {ECO:0000313|EMBL:BAC97291.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio vulnificus (strain YJ016).;"
anamox3_curated_scaffold_2035_2
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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comp(1373..2485)
DNA (1113bp) protein (371aa)
family 2 glycosyl transferase bin=BACIGN_2 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=BACIGN_2 organism_group=Unknown_CP
family 2 glycosyl transferase
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_2035_3
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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2551..3900
DNA (1350bp) protein (450aa)
hypothetical protein bin=BACIGN_2 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP
MATE efflux family protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_2035_4
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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3954..4592
DNA (639bp) protein (213aa)
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=BACIGN_2 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=BACIGN_2 organism_group=Unknown_CP
ECF subfamily RNA polymerase sigma-24 subunit
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox3_curated_scaffold_2035_5
unknown

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4579..5001
DNA (423bp) protein (141aa)

This feature has no annotations

anamox3_curated_scaffold_2035_6
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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4998..5492
DNA (495bp) protein (165aa)
id=7717989 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox3_curated_scaffold_2035_7
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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comp(5507..8965)
DNA (3459bp) protein (1153aa)
dnaE; DNA polymerase III subunit alpha; K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
DNA polymerase III, alpha subunit
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox3_curated_scaffold_2035_8
Halobacteriovorax marinus, Halobacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9058..10071)
DNA (1014bp) protein (338aa)
putative binding-protein-dependent transport system membrane component; K02042 phosphonate transport system permease protein bin=BACIGN_2 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
putative binding-protein-dependent transport system membrane component
Putative binding-protein-dependent transport system membrane component {ECO:0000313|EMBL:CBW26776.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Halobacteriovoraceae; Halobacteriovorax.;" source="Halobacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ); (Bacteriovorax marinus).;"
anamox3_curated_scaffold_2035_9
uncultured Bacteroidetes bacterium, Bacteroidetes, Bacteria

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comp(10068..10829)
DNA (762bp) protein (254aa)
putative ABC transport ATP-binding protein; K02041 phosphonate transport system ATP-binding protein [EC:3.6.3.28] bin=BACIGN_2 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; species="Bacteria; Bacteroidetes; environmental samples.;" source="uncultured Bacteroidetes bacterium.;"
putative ABC transport ATP-binding protein
anamox3_curated_scaffold_2035_10
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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10957..11661
DNA (705bp) protein (235aa)
cytidylate kinase; K00945 cytidylate kinase [EC:2.7.4.14] bin=BACIGN_2 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
cmk; cytidylate kinase
anamox3_curated_scaffold_2035_11
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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11704..12603
DNA (900bp) protein (300aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] bin=BACIGN_2 species=Cyclobacterium marinum genus=Cyclobacterium taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
Tax=GWA2_Ignavibacteria_54_16_curated
anamox3_curated_scaffold_2035_trna_1
unknown

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comp(13197..13269)
DNA (73bp)
transferRNA Gly
anamox3_curated_scaffold_2035_12
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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13352..15316
DNA (1965bp) protein (655aa)
glycoside hydrolase family 57 bin=BACIGN_2 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
alpha-amylase/alpha-mannosidase
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox3_curated_scaffold_2035_13
unknown

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comp(15317..15967)
DNA (651bp) protein (217aa)

This feature has no annotations

anamox3_curated_scaffold_2035_14

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comp(15967..16620)
DNA (654bp) protein (218aa)
regulatory protein RecX; K03565 regulatory protein bin=BACIGN_2 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=BACIGN_2 organism_group=Unknown_CP
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
recX; Regulatory protein RecX
anamox3_curated_scaffold_2035_15
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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comp(16620..17093)
DNA (474bp) protein (158aa)
recA protein (EC:3.6.3.8); K03553 recombination protein RecA bin=BACIGN_2 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
Recombination protein RecA
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Displaying 16 items

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