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anamox3_curated_scaffold_344

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox3_curated_scaffold_344_1
Desulfonatronospira thiodismutans, Desulfonatronospira, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(440..910)
DNA (471bp) protein (157aa)
Anti-sigma factor antagonist Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIC7_CHLTF
anti-anti-sigma factor
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfohalobiaceae; Desulfonatronospira.;" source="Desulfonatronospira thiodismutans ASO3-1.;"
anamox3_curated_scaffold_344_2
Musa acuminata, Musa, Zingiberales, commelinids, Streptophyta, Viridiplantae

Not on your lists

comp(913..1629)
DNA (717bp) protein (239aa)
Uncharacterized protein Tax=Musa acuminata subsp. malaccensis RepID=M0SXM5_MUSAM
Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P11460_001}; species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Zingiberales; Musaceae; Musa.;" source="Musa acuminata subsp. malaccensis (Wild banana) (Musa malaccensis).;"
glutathione S-transferase domain-containing protein
anamox3_curated_scaffold_344_3
GWA2_WOR_2_53_43_curated, WOR-2, Bacteria

Not on your lists

1712..2656
DNA (945bp) protein (315aa)
hypothetical protein bin=GWA2_OP3_53_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
Tax=GWA2_WOR_2_53_43_curated
anamox3_curated_scaffold_344_4
R_Omnitrophica_45_10b, Omnitrophica, Bacteria

Not on your lists

2863..3123
DNA (261bp) protein (87aa)
Ribosomal RNA large subunit methyltransferase H bin=GWA2_OP3_52_12 species=unknown genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_Omnitrophica_45_10b_curated
anamox3_curated_scaffold_344_5
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

3130..3900
DNA (771bp) protein (257aa)
Ribosomal RNA small subunit methyltransferase E Tax=Chthoniobacter flavus Ellin428 RepID=B4D419_9BACT
16S rRNA methyltransferase
Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
anamox3_curated_scaffold_344_6
R_OP3X_51_18, OP3X, Bacteria

Not on your lists

3878..4309
DNA (432bp) protein (144aa)
Tax=RIFCSPHIGHO2_02_FULL_OP3X_51_18_curated
anamox3_curated_scaffold_344_7
R_OP3X_51_18, OP3X, Bacteria

Not on your lists

4427..4969
DNA (543bp) protein (181aa)
Colicin V production protein Tax=Polynucleobacter necessarius subsp. asymbioticus (strain DSM 18221 / CIP 109841 / QLW-P1DMWA-1) RepID=A4SWY1_POLSQ
colicin V production protein
Tax=RIFCSPHIGHO2_02_FULL_OP3X_51_18_curated
anamox3_curated_scaffold_344_8
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

5004..6770
DNA (1767bp) protein (589aa)
DNA primase (EC:2.7.7.-)
DNA primase bin=GWF2_OP3_38_59 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
anamox3_curated_scaffold_344_9
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

6757..8523
DNA (1767bp) protein (589aa)
RNA polymerase sigma factor bin=GWB2_CP_45_9 species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
RNA polymerase sigma70 factor
Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
anamox3_curated_scaffold_344_trna_1
unknown

Not on your lists

8632..8705
DNA (74bp)
transferRNA Met
anamox3_curated_scaffold_344_trna_2
unknown

Not on your lists

8724..8797
DNA (74bp)
transferRNA Val
anamox3_curated_scaffold_344_10
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

8859..9578
DNA (720bp) protein (240aa)
Putative uncharacterized protein bin=GWF2_OP3_43_52 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
anamox3_curated_scaffold_344_11
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

9575..9997
DNA (423bp) protein (141aa)
Putative SAM-dependent methyltransferase Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PQ68_9FIRM
ribonuclease H
Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
anamox3_curated_scaffold_344_12
unknown

Not on your lists

10472..10750
DNA (279bp) protein (93aa)

This feature has no annotations

anamox3_curated_scaffold_344_13
R_OP3X_51_18, OP3X, Bacteria

Not on your lists

10895..11893
DNA (999bp) protein (333aa)
C-terminal processing peptidase-2 Tax=cyanobacterium UCYN-A RepID=D3EP43_UCYNA
C-terminal processing peptidase-2
Tax=RIFCSPHIGHO2_02_FULL_OP3X_51_18_curated
anamox3_curated_scaffold_344_14
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

11897..12331
DNA (435bp) protein (145aa)
hypothetical protein bin=bin5_DeltaP species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin5_DeltaP organism_group=Deltaproteobacteria
methyl-accepting chemotaxis sensory transducer
Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
anamox3_curated_scaffold_344_15
CG_Omnitr_06, Omnitrophica, Bacteria

Not on your lists

12658..13119
DNA (462bp) protein (154aa)
cell division protein MraZ Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B55CF3
MraZ protein
Tax=CG_Omnitr_06
anamox3_curated_scaffold_344_16
unknown

Not on your lists

13131..13340
DNA (210bp) protein (70aa)

This feature has no annotations

anamox3_curated_scaffold_344_17
R_OP3X_51_18, OP3X, Bacteria

Not on your lists

13363..14262
DNA (900bp) protein (300aa)
Ribosomal RNA small subunit methyltransferase H Tax=Desulforudis audaxviator (strain MP104C) RepID=RSMH_DESAP
S-adenosyl-methyltransferase MraW
Tax=RIFCSPHIGHO2_02_FULL_OP3X_51_18_curated
anamox3_curated_scaffold_344_18
R_OP3X_51_18, OP3X, Bacteria

Not on your lists

14259..14639
DNA (381bp) protein (127aa)
Tax=RIFCSPHIGHO2_02_FULL_OP3X_51_18_curated
anamox3_curated_scaffold_344_19
CG_Omnitr_06, Omnitrophica, Bacteria

Not on your lists

14753..16519
DNA (1767bp) protein (589aa)
Peptidoglycan glycosyltransferase bin=GWF2_OP3_43_52 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
ftsI; peptidoglycan transglycosylase and transpeptidase FtsI
Tax=CG_Omnitr_06
anamox3_curated_scaffold_344_20
CG_Omnitr_06, Omnitrophica, Bacteria

Not on your lists

16516..17982
DNA (1467bp) protein (489aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase Tax=Paenibacillus sp. P22 RepID=T2LZ82_9BACL
UDP-N-acetylmuramyl tripeptide synthetase
Tax=CG_Omnitr_06
anamox3_curated_scaffold_344_21
R_WOR_2_68_15, WOR-2, Bacteria

Not on your lists

17972..19351
DNA (1380bp) protein (460aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase Tax=Geobacter sulfurreducens RepID=D7AEL5_GEOSK
murF; UDP-N-acetylmuramylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_68_15_curated
anamox3_curated_scaffold_344_22
CG_Omnitr_06, Omnitrophica, Bacteria

Not on your lists

19324..20412
DNA (1089bp) protein (363aa)
phospho-N-acetylmuramoyl-pentapeptide-transferase Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B57CD7
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase
Tax=CG_Omnitr_06
anamox3_curated_scaffold_344_23
R_OP3X_51_18, OP3X, Bacteria

Not on your lists

20409..21815
DNA (1407bp) protein (469aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase; K01925 UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
UDP-N-acetylmuramoylalanine--D-glutamate ligase
Tax=RIFCSPHIGHO2_02_FULL_OP3X_51_18_curated
anamox3_curated_scaffold_344_24
CG_Omnitr_06, Omnitrophica, Bacteria

Not on your lists

21803..22915
DNA (1113bp) protein (371aa)
stage V sporulation protein E; K03588 cell division protein FtsW bin=bin7_NC10_sister species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
stage V sporulation protein E
Tax=CG_Omnitr_06
anamox3_curated_scaffold_344_25
R_OP3X_51_18, OP3X, Bacteria

Not on your lists

22912..24012
DNA (1101bp) protein (367aa)
murG; UDP-N-acetylglucosamine:N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OP3X_51_18_curated
anamox3_curated_scaffold_344_26
R_WOR_2_68_15, WOR-2, Bacteria

Not on your lists

24009..26282
DNA (2274bp) protein (758aa)
UDP-N-acetylmuramate/alanine ligase Tax=Chthoniobacter flavus Ellin428 RepID=B4D1Z4_9BACT
UDP-N-acetylmuramate--L-alanine ligase
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_68_15_curated
anamox3_curated_scaffold_344_27
R_WOR_2_68_15, WOR-2, Bacteria

Not on your lists

26279..27259
DNA (981bp) protein (327aa)
UDP-N-acetylmuramate--L-alanine ligase bin=GWA2_OP3_53_43 species=unknown genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
ddl; D-alanine--D-alanine ligase
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_68_15_curated
anamox3_curated_scaffold_344_28
R_OP3X_51_18, OP3X, Bacteria

Not on your lists

27259..28077
DNA (819bp) protein (273aa)
Cell division protein FtsQ Tax=Streptomyces tsukubaensis NRRL18488 RepID=I2MWT9_9ACTO
Tax=RIFCSPHIGHO2_02_FULL_OP3X_51_18_curated
Displaying items 1-30 of 57 in total

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