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anamox3_curated_scaffold_220

Search features with annotation key words

Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox3_curated_scaffold_220_1
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(476..1390)
DNA (915bp) protein (305aa)
Uncharacterized protein Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SMR4_THEM7
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
anamox3_curated_scaffold_220_2
CG_Omnitr_06, Omnitrophica, Bacteria

Not on your lists

comp(1387..2214)
DNA (828bp) protein (276aa)
Uncharacterized protein Tax=Nitrospina gracilis 3/211 RepID=M1YW19_9BACT
putative lipoprotein
Tax=CG_Omnitr_06
anamox3_curated_scaffold_220_3
CG_Omnitr_06, Omnitrophica, Bacteria

Not on your lists

comp(2211..2462)
DNA (252bp) protein (84aa)
Tax=CG_Omnitr_06
anamox3_curated_scaffold_220_4
R_OP3X_51_18, OP3X, Bacteria

Not on your lists

comp(2470..3315)
DNA (846bp) protein (282aa)
ABC transporter substrate-binding protein Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B47D00
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OP3X_51_18_curated
anamox3_curated_scaffold_220_5
R_OP3X_51_18, OP3X, Bacteria

Not on your lists

comp(3317..3748)
DNA (432bp) protein (144aa)
Tax=RIFCSPHIGHO2_02_FULL_OP3X_51_18_curated
anamox3_curated_scaffold_220_6
CG_Omnitr_06, Omnitrophica, Bacteria

Not on your lists

comp(3769..4512)
DNA (744bp) protein (248aa)
Succinate dehydrogenase and fumarate reductase iron-sulfur protein Tax=Leptospira meyeri RepID=K5BPC1_LEPME
sdhB; succinate dehydrogenase/fumarate reductase iron-sulfur subunit
Tax=CG_Omnitr_06
anamox3_curated_scaffold_220_7
R_OP3X_51_18, OP3X, Bacteria

Not on your lists

comp(4512..6425)
DNA (1914bp) protein (638aa)
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.99.1)
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit Tax=Pedosphaera parvula Ellin514 RepID=B9XQF3_9BACT
Tax=RIFCSPHIGHO2_02_FULL_OP3X_51_18_curated
anamox3_curated_scaffold_220_8
R_OP3X_51_18, OP3X, Bacteria

Not on your lists

comp(6427..7110)
DNA (684bp) protein (228aa)
Uncharacterized protein Tax=Leptospira RepID=Q050R8_LEPBL
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OP3X_51_18_curated
anamox3_curated_scaffold_220_9
R_OP3X_51_18, OP3X, Bacteria

Not on your lists

comp(7377..7736)
DNA (360bp) protein (120aa)
Two component system response regulator, modulated diguanylate cyclase bin=GWC2_Deltaproteobacteria_42_51 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
phoP1; alkaline phosphatase synthesis transcriptional regulatory protein PhoP
Tax=RIFCSPHIGHO2_02_FULL_OP3X_51_18_curated
anamox3_curated_scaffold_220_10
R_OP3X_51_18, OP3X, Bacteria

Not on your lists

comp(7776..8345)
DNA (570bp) protein (190aa)
N6-adenine-specific methylase Tax=uncultured candidate division OP1 bacterium RepID=H5SR19_9BACT
methyltransferase
Tax=RIFCSPHIGHO2_02_FULL_OP3X_51_18_curated
anamox3_curated_scaffold_220_11
CG_Omnitr_06, Omnitrophica, Bacteria

Not on your lists

comp(8350..10443)
DNA (2094bp) protein (698aa)
ATP-dependent DNA helicase Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67PM4_SYMTH
ATP-dependent DNA helicase RecG
Tax=CG_Omnitr_06
anamox3_curated_scaffold_220_12
R_OP3X_51_18, OP3X, Bacteria

Not on your lists


10554..10841
DNA (288bp) protein (96aa)
hypothetical protein GobsU_25426 bin=GWF2_Planctomycetes_50_10 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
50S ribosomal protein L28
Tax=RIFCSPHIGHO2_02_FULL_OP3X_51_18_curated
anamox3_curated_scaffold_220_13
R_OP3X_51_18, OP3X, Bacteria

Not on your lists

comp(10771..12513)
DNA (1743bp) protein (581aa)
recombination protein RecJ Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B62DA7
single-stranded-DNA-specific exonuclease RecJ
Tax=RIFCSPHIGHO2_02_FULL_OP3X_51_18_curated
anamox3_curated_scaffold_220_14
R_OP3X_51_18, OP3X, Bacteria

Not on your lists

comp(12517..14715)
DNA (2199bp) protein (733aa)
hypothetical protein Tax=Omnitrophica bacterium SCGC AAA252-B19 RepID=UPI000366DE44
protein-export membrane protein SecD
Tax=RIFCSPHIGHO2_02_FULL_OP3X_51_18_curated
anamox3_curated_scaffold_220_15
CG_Omnitr_05, Omnitrophica, Bacteria

Not on your lists

comp(14712..15029)
DNA (318bp) protein (106aa)
Protein translocase subunit yajC bin=GWC2_Deltaproteobacteria_42_51 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
Tax=CG_Omnitr_05
anamox3_curated_scaffold_220_16
CG_Omnitr_05, Omnitrophica, Bacteria

Not on your lists

comp(15041..16198)
DNA (1158bp) protein (386aa)
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase Tax=Thermoanaerobacter RepID=TGT_THEPX
Tax=CG_Omnitr_05
anamox3_curated_scaffold_220_17
GWA2_OP3_50_21_curated, Omnitrophica, Bacteria

Not on your lists

comp(16195..17085)
DNA (891bp) protein (297aa)
hypothetical protein Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B394A2
hypothetical protein
Tax=GWA2_OP3_50_21_curated
anamox3_curated_scaffold_220_18
R_OP3X_51_18, OP3X, Bacteria

Not on your lists

comp(17099..18112)
DNA (1014bp) protein (338aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC:5.-.-.-)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase bin=GWC2_Methylomirabilis_70_16 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPHIGHO2_02_FULL_OP3X_51_18_curated
anamox3_curated_scaffold_220_19
R_OP3X_51_18, OP3X, Bacteria

Not on your lists

comp(18109..19281)
DNA (1173bp) protein (391aa)
SpoIID/LytB domain bin=GWA2_OP3_53_43 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
SpoIID/LytB domain-containing protein
Tax=RIFCSPHIGHO2_02_FULL_OP3X_51_18_curated
anamox3_curated_scaffold_220_20
CG_Omnitr_05, Omnitrophica, Bacteria

Not on your lists

comp(19288..20376)
DNA (1089bp) protein (363aa)
ruvB; Holliday junction ATP-dependent DNA helicase RuvB (EC:3.6.1.-)
Holliday junction ATP-dependent DNA helicase RuvB bin=GWF2_OP3_43_52 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
Tax=CG_Omnitr_05
anamox3_curated_scaffold_220_21
CG_Omnitr_06, Omnitrophica, Bacteria

Not on your lists

comp(20379..21011)
DNA (633bp) protein (211aa)
Holliday junction ATP-dependent DNA helicase RuvA bin=GWF2_OP3_43_52 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
DNA recombination protein RuvA domain I
Tax=CG_Omnitr_06
anamox3_curated_scaffold_220_22
CG_Omnitr_06, Omnitrophica, Bacteria

Not on your lists

comp(21021..21518)
DNA (498bp) protein (166aa)
ruvC; crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
hypothetical protein Tax=Omnitrophica bacterium SCGC AAA252-B19 RepID=UPI00036E9414
Tax=CG_Omnitr_06
anamox3_curated_scaffold_220_23
CG_Omnitr_06, Omnitrophica, Bacteria

Not on your lists

comp(21515..22264)
DNA (750bp) protein (250aa)
Probable transcriptional regulatory protein Sfum_0996 bin=GWB2_CP_45_9 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
hypothetical protein
Tax=CG_Omnitr_06
anamox3_curated_scaffold_220_24
Pseudomonas sp. 20_BN, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22335..22994)
DNA (660bp) protein (220aa)
Phosphoglycolate phosphatase {ECO:0000256|HAMAP-Rule:MF_00495, ECO:0000256|SAAS:SAAS00077902}; Short=PGP {ECO:0000256|HAMAP-Rule:MF_00495};; Short=PGPase {ECO:0000256|HAMAP-Rule:MF_00495};; EC=3.1.3.18 {ECO:0000256|HAMAP-Rule:MF_00495, ECO:0000256|SAAS:SAAS00077902};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 20_BN.;"
gph; phosphoglycolate phosphatase (EC:3.1.3.18)
Phosphoglycolate phosphatase, bacterial Tax=Treponema socranskii subsp. paredis ATCC 35535 RepID=S3KM34_TRESO
anamox3_curated_scaffold_220_25
R_Omnitrophica_45_10b, Omnitrophica, Bacteria

Not on your lists

comp(23055..23537)
DNA (483bp) protein (161aa)
Tax=RIFCSPLOWO2_01_FULL_Omnitrophica_45_10b_curated
anamox3_curated_scaffold_220_26
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23599..23808)
DNA (210bp) protein (70aa)
hypothetical protein Tax=Methylococcus capsulatus RepID=UPI00030A3FAE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAU90682.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
anamox3_curated_scaffold_220_27
R_WOR_2_48_11, WOR-2, Bacteria

Not on your lists

comp(23877..24635)
DNA (759bp) protein (253aa)
Exodeoxyribonuclease III Xth bin=GWA2_OP3_53_43 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
exoA; exodeoxyribonuclease
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
anamox3_curated_scaffold_220_28
unknown

Not on your lists

comp(24632..25462)
DNA (831bp) protein (277aa)

This feature has no annotations

anamox3_curated_scaffold_220_29
unknown

Not on your lists

comp(25459..25812)
DNA (354bp) protein (118aa)

This feature has no annotations

anamox3_curated_scaffold_220_30
unknown

Not on your lists

comp(25867..26133)
DNA (267bp) protein (89aa)

This feature has no annotations

Displaying items 1-30 of 81 in total

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