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anamox3_curated_scaffold_1203

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox3_curated_scaffold_1203_1
unknown

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comp(1..120)
DNA (120bp) protein (40aa)

This feature has no annotations

anamox3_curated_scaffold_1203_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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526..2160
DNA (1635bp) protein (545aa)
Uncharacterized protein Tax=Sorangium cellulosum (strain So ce56) RepID=A9FJP4_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN91992.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
anamox3_curated_scaffold_1203_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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2790..3956
DNA (1167bp) protein (389aa)
aminotransferase (EC:2.6.1.-) bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
aminotransferase (EC:2.6.1.-)
Aminotransferase {ECO:0000313|EMBL:ABJ84588.1}; EC=2.6.1.- {ECO:0000313|EMBL:ABJ84588.1};; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
anamox3_curated_scaffold_1203_4
Selenomonas flueggei, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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4223..4825
DNA (603bp) protein (201aa)
Transcriptional regulator, TetR family Tax=Selenomonas flueggei ATCC 43531 RepID=C4V542_9FIRM
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EEQ48090.1}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas flueggei ATCC 43531.;"
regulatory protein TetR
anamox3_curated_scaffold_1203_5

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5273..5818
DNA (546bp) protein (182aa)
GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase 1 Tax=Dehalococcoides mccartyi RepID=GCH1_DEHSB
Marine sediment metagenome DNA, contig: S01H1_L04334 {ECO:0000313|EMBL:GAF83871.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
anamox3_curated_scaffold_1203_6
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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5860..6441
DNA (582bp) protein (194aa)
Putative uncharacterized protein Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CL01_DESK7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG15366.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17).;"
anamox3_curated_scaffold_1203_7
BJP_IG2069_Chloroflexi_70_12, Chloroflexi, Bacteria

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6438..6869
DNA (432bp) protein (144aa)
globin Tax=Laceyella sacchari RepID=UPI0003B4B0D7
globin
Tax=BJP_IG2069_Chloroflexi_70_12
anamox3_curated_scaffold_1203_8
BJP_IG2069_Chloroflexi_70_12, Chloroflexi, Bacteria

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6917..7996
DNA (1080bp) protein (360aa)
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI00037B702E
formyl-CoA transferase
Tax=BJP_IG2069_Chloroflexi_70_12
anamox3_curated_scaffold_1203_9
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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7993..9219
DNA (1227bp) protein (409aa)
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI00035D2F03
L-carnitine dehydratase/bile acid-inducible protein F
Tax=RBG_16_Chloroflexi_68_14_curated
anamox3_curated_scaffold_1203_10
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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9266..10582
DNA (1317bp) protein (439aa)
Signal recognition particle protein Tax=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) RepID=B8J1U3_DESDA
signal recognition particle protein
Tax=RBG_16_Chloroflexi_64_32_curated
anamox3_curated_scaffold_1203_11
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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10776..11228
DNA (453bp) protein (151aa)
30S ribosomal protein S16 Tax=Mobiluncus curtisii subsp. curtisii ATCC 35241 RepID=E0N2C7_9ACTO
rpsP; 30S ribosomal protein S16
Tax=RBG_16_Chloroflexi_64_32_curated
anamox3_curated_scaffold_1203_12
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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11232..11474
DNA (243bp) protein (81aa)
UPF0109 protein BN450_02609 Tax=Roseburia sp. CAG:100 RepID=R7R8P5_9FIRM
UPF0109 protein BN450_02609 {ECO:0000256|HAMAP-Rule:MF_00088}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
RNA-binding protein (KH domain)
anamox3_curated_scaffold_1203_13

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11630..12070
DNA (441bp) protein (147aa)
Ribosome maturation factor RimM Tax=Roseiflexus sp. (strain RS-1) RepID=RIMM_ROSS1
Uncharacterized protein {ECO:0000313|EMBL:KKL51996.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
16S rRNA processing protein RimM
anamox3_curated_scaffold_1203_14
unknown

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12179..12349
DNA (171bp) protein (57aa)

This feature has no annotations

anamox3_curated_scaffold_1203_trna_1
unknown

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12412..12492
DNA (81bp)
transferRNA Ala
anamox3_curated_scaffold_1203_15
RBG_13_ACD39_59_9_curated, ACD39, Bacteria

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comp(12548..12988)
DNA (441bp) protein (147aa)
Tax=RBG_13_ACD39_59_9_curated
anamox3_curated_scaffold_1203_16

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13419..14963
DNA (1545bp) protein (515aa)
Carboxyl transferase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TF69_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:KKM75676.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
pccB; propionyl-CoA carboxylase subunit beta
anamox3_curated_scaffold_1203_17
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

15049..16263
DNA (1215bp) protein (405aa)
Putative GCN5-related N-acetyltransferase Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RJH3_BLASD
putative GCN5-related N-acetyltransferase
Tax=RBG_16_Chloroflexi_68_14_curated
anamox3_curated_scaffold_1203_18
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16430..17287
DNA (858bp) protein (286aa)
phosphohydrolase Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000372842E
Phosphohydrolase {ECO:0000313|EMBL:GAO36254.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
putative domain HDIG-containing protein
anamox3_curated_scaffold_1203_19
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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17431..19017
DNA (1587bp) protein (529aa)
phosphoenolpyruvate carboxykinase
Phosphoenolpyruvate carboxykinase [ATP] bin=GWC2_Pelobacter_58_13 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
anamox3_curated_scaffold_1203_20
unknown

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19085..19507
DNA (423bp) protein (141aa)

This feature has no annotations

anamox3_curated_scaffold_1203_21
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(19535..21892)
DNA (2358bp) protein (786aa)
Uncharacterized protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2D2_SPHTD
Uncharacterized protein {ECO:0000313|EMBL:ACZ38399.1}; Flags: Precursor;; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
protein of unknown function DUF214
anamox3_curated_scaffold_1203_22
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(21897..22619)
DNA (723bp) protein (241aa)
ABC transporter related protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2D3_SPHTD
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ACZ38400.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
anamox3_curated_scaffold_1203_23
unknown

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22781..22918
DNA (138bp) protein (46aa)

This feature has no annotations

Displaying 24 items

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