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anamox3_curated_scaffold_1021

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox3_curated_scaffold_1021_1
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(1..450)
DNA (450bp) protein (150aa)
Elongation factor Tu Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C478_SPHTD
translation elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
anamox3_curated_scaffold_1021_trna_3
unknown

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comp(521..593)
DNA (73bp)
transferRNA Thr
anamox3_curated_scaffold_1021_trna_2
unknown

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comp(659..742)
DNA (84bp)
transferRNA Tyr
anamox3_curated_scaffold_1021_trna_1
unknown

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comp(785..856)
DNA (72bp)
transferRNA Thr
anamox3_curated_scaffold_1021_2
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(1001..1846)
DNA (846bp) protein (282aa)
hypothetical protein Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B359C6
arsenite S-adenosylmethyltransferase
Tax=RBG_16_Chloroflexi_68_14_curated
anamox3_curated_scaffold_1021_3
unknown

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comp(2245..2454)
DNA (210bp) protein (70aa)

This feature has no annotations

anamox3_curated_scaffold_1021_4
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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2739..3152
DNA (414bp) protein (138aa)
Putative uncharacterized protein Tax=Thiocapsa marina 5811 RepID=F9UD12_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EGV17756.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
anamox3_curated_scaffold_1021_5

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3419..4849
DNA (1431bp) protein (477aa)
UPI0003D04F7C related cluster Tax=unknown RepID=UPI0003D04F7C
Uncharacterized protein {ECO:0000313|EMBL:KKK62574.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
anamox3_curated_scaffold_1021_6
Alcanivorax dieselolei, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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4925..5854
DNA (930bp) protein (310aa)
SMP-30/Gluconolaconase/LRE-like region-containing protein Tax=Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5) RepID=K0CEA1_ALCDB
SMP-30/Gluconolaconase/LRE-like region-containing protein
SMP-30/Gluconolaconase/LRE-like region-containing protein {ECO:0000313|EMBL:AFT69906.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5).;"
anamox3_curated_scaffold_1021_7
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5919..6716)
DNA (798bp) protein (266aa)
Putative uncharacterized protein Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67RL0_SYMTH
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAD39683.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium thermophilum (strain T / IAM 14863).;"
anamox3_curated_scaffold_1021_8
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

6848..7990
DNA (1143bp) protein (381aa)
Uncharacterized protein Tax=Plesiocystis pacifica SIR-1 RepID=A6GHK5_9DELT
Tax=RBG_16_Actinobacteria_67_15_curated
anamox3_curated_scaffold_1021_9
unknown

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7987..8538
DNA (552bp) protein (184aa)

This feature has no annotations

anamox3_curated_scaffold_1021_10
bacterium YEK0313, Bacteria

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8542..9204
DNA (663bp) protein (221aa)
hypothetical protein Tax=Zavarzinella formosa RepID=UPI0002FD7C03
Uncharacterized protein {ECO:0000313|EMBL:CEJ15509.1}; species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
anamox3_curated_scaffold_1021_11
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

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9271..10020
DNA (750bp) protein (250aa)
Probable transcriptional regulatory protein Dehly_0207 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K3L5_DEHLB
hypothetical protein
Tax=RBG_16_RIF_CHLX_69_14_curated
anamox3_curated_scaffold_1021_12
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10264..10992)
DNA (729bp) protein (243aa)
lipB; lipoate biosynthesis protein B; Lipoate-protein ligase B (EC:2.3.1.-) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
lipoate-protein ligase B/lipoate synthase
Tax=BJP_IG2069_Desfulfarculales_53_13
anamox3_curated_scaffold_1021_13
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(10989..12149)
DNA (1161bp) protein (387aa)
dihydrolipoamide acetyltransferase Tax=Streptomyces chartreusis RepID=UPI000262E6D1
Dihydrolipoamide acetyltransferase {ECO:0000313|EMBL:KFF98945.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabiei.;"
transketolase central subunit
anamox3_curated_scaffold_1021_14

Not on your lists

comp(12222..13937)
DNA (1716bp) protein (572aa)
Putative two-component response regulator Tax=Gordonia sputi NBRC 100414 RepID=H5TZL8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KKK62574.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
LuxR family transcriptional regulator
anamox3_curated_scaffold_1021_15
unknown

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13990..14244
DNA (255bp) protein (85aa)

This feature has no annotations

anamox3_curated_scaffold_1021_16
unknown

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comp(14256..14453)
DNA (198bp) protein (66aa)

This feature has no annotations

anamox3_curated_scaffold_1021_17
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14453..15283)
DNA (831bp) protein (277aa)
thymidylate synthase (FAD) (EC:2.1.1.148)
Thymidylate synthase ThyX {ECO:0000256|HAMAP-Rule:MF_01408}; Short=TS {ECO:0000256|HAMAP-Rule:MF_01408};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_01408};; EC=2.1.1.148 {ECO:0000256|HAMAP-Rule:MF_01408};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
Thymidylate synthase ThyX Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IQ31_ANADE
anamox3_curated_scaffold_1021_18
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15374..15898)
DNA (525bp) protein (175aa)
HxlR family HTH transcriptional regulator Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AXH2_CLOA9
HxlR family HTH transcriptional regulator
HxlR family HTH transcriptional regulator {ECO:0000313|EMBL:AFS78523.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
anamox3_curated_scaffold_1021_19
Leisingera sp. ANG-Vp, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15924..16442
DNA (519bp) protein (173aa)
glyoxalase Tax=Oceanicola sp. S124 RepID=UPI00025593C5
Glyoxalase {ECO:0000313|EMBL:KIC21553.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG-Vp.;"
glyoxalase family protein
anamox3_curated_scaffold_1021_20
Chloroflexus sp. Y-400-fl, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists


16503..18278
DNA (1776bp) protein (592aa)
Aspartate--tRNA(Asp/Asn) ligase {ECO:0000255|HAMAP-Rule:MF_00044}; EC=6.1.1.23 {ECO:0000255|HAMAP-Rule:MF_00044};; Aspartyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00044}; Short=AspRS {ECO:0000255|HAMAP-Rule:MF_00044};; Non-discriminating aspartyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00044}; Short=ND-AspRS {ECO:0000255|HAMAP-Rule:MF_00044};; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl).;"
Aspartate--tRNA ligase Tax=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) RepID=SYD_CHLSY
aspartyl-tRNA synthetase
anamox3_curated_scaffold_1021_21

Not on your lists

18466..20139
DNA (1674bp) protein (558aa)
hypothetical protein, partial Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI000374A86D
Extracellular solute-binding protein {ECO:0000313|EMBL:AHZ45587.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
PepT family, periplasmic binding protein
anamox3_curated_scaffold_1021_22

Not on your lists

20146..21096
DNA (951bp) protein (317aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003755B2A
Uncharacterized protein {ECO:0000313|EMBL:KKM17374.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
binding-protein-dependent transport system inner membrane protein
anamox3_curated_scaffold_1021_23
BJP_IG2069_Chloroflexi_70_12, Chloroflexi, Bacteria

Not on your lists

21101..22078
DNA (978bp) protein (326aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00037BF1BC
peptide ABC transporter inner membrane protein
Tax=BJP_IG2069_Chloroflexi_70_12
anamox3_curated_scaffold_1021_24

Not on your lists

22163..23455
DNA (1293bp) protein (431aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
trigger factor Tax=Paenibacillus ginsengihumi RepID=UPI000367CEC6
trigger factor
anamox3_curated_scaffold_1021_25
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

23452..24081
DNA (630bp) protein (210aa)
det:DET0710 clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
endopeptidase Clp (EC:3.4.21.92)
Tax=RBG_13_Chloroflexi_51_36_curated
anamox3_curated_scaffold_1021_26

Not on your lists

24101..25417
DNA (1317bp) protein (439aa)
ATP-dependent Clp protease ATP-binding subunit ClpX Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U907_9CHLR
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
sigma 54 interacting domain-containing protein
anamox3_curated_scaffold_1021_27
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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25632..26489
DNA (858bp) protein (286aa)
Glyoxalase family protein bin=GWC2_Methylomirabilis_70_16 species=Silicibacter sp. TrichCH4B genus=Ruegeria taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RBG_16_Chloroflexi_68_14_curated
Displaying items 1-30 of 31 in total

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