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anamox3_curated_scaffold_576

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox3_curated_scaffold_576_1
Thermacetogenium phaeum, Thermacetogenium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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3..260
DNA (258bp) protein (86aa)
RNA polymerase sigma factor Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LH07_THEPS
fliA; RNA polymerase flagellar operon sigma factor FliA
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermacetogenium.;" source="Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB).;"
anamox3_curated_scaffold_576_2
BJP_IG2069_Chloroflexi_70_12, Chloroflexi, Bacteria

Not on your lists

322..1077
DNA (756bp) protein (252aa)
Putative two-component system response regulator Tax=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680) RepID=Q82KG5_STRAW
two-component system response regulator
Tax=BJP_IG2069_Chloroflexi_70_12
anamox3_curated_scaffold_576_3
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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1115..3043
DNA (1929bp) protein (643aa)
Putative Histidine kinase bin=GWC2_Chloroflexi_73_18 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
PAS sensor protein
Tax=GWC2_RIF_CHLX_73_18_curated
anamox3_curated_scaffold_576_4
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

3163..3804
DNA (642bp) protein (214aa)
Two component transcriptional regulator, LuxR family Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NRQ8_ROSCS
two component LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ABU60254.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
anamox3_curated_scaffold_576_5
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3851..5584)
DNA (1734bp) protein (578aa)
Para-aminobenzoate synthase, subunit I Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LVG5_DESBD
Para-aminobenzoate synthase, subunit I {ECO:0000313|EMBL:CDI03820.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
para-aminobenzoate synthase subunit I
anamox3_curated_scaffold_576_6
unknown

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comp(5623..5772)
DNA (150bp) protein (50aa)

This feature has no annotations

anamox3_curated_scaffold_576_7
RLO_PLX_64_10, Bacteria

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comp(5821..6942)
DNA (1122bp) protein (374aa)
Alanine racemase domain protein bin=GWC2_Nitrospirae_57_13 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
alanine racemase domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
anamox3_curated_scaffold_576_8
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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7000..8253
DNA (1254bp) protein (418aa)
Major facilitator superfamily MFS_1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAX4_SPHTD
major facilitator superfamily MFS_1
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACZ39921.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
anamox3_curated_scaffold_576_9
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(8288..10135)
DNA (1848bp) protein (616aa)
GTP-binding protein TypA Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TIJ3_9CHLR
GTP-binding protein TypA {ECO:0000313|EMBL:EFH89250.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
typA; GTP-binding protein
anamox3_curated_scaffold_576_10

Not on your lists

10297..10989
DNA (693bp) protein (231aa)
clpP; ATP-dependent Clp protease, proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit Tax=Dehalococcoides mccartyi BTF08 RepID=M1QSN4_9CHLR
Marine sediment metagenome DNA, contig: S03H2_S15892 {ECO:0000313|EMBL:GAH69780.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
anamox3_curated_scaffold_576_11
Streptomyces roseochromogenus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11014..12723)
DNA (1710bp) protein (570aa)
sulfonate ABC transporter permease Tax=Streptomyces sp. MspMP-M5 RepID=UPI000366741F
Sulfonate ABC transporter permease {ECO:0000313|EMBL:EST19045.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseochromogenus subsp. oscitans DS 12.976.;"
putative binding-protein-dependent transport systems inner membrane component
anamox3_curated_scaffold_576_12
Streptomyces aurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12792..14138)
DNA (1347bp) protein (449aa)
Putative nitrate transport ATP-binding protein NrtD Tax=Streptomyces aurantiacus JA 4570 RepID=S3ZUF4_9ACTO
Putative nitrate transport ATP-binding protein NrtD {ECO:0000313|EMBL:EPH42030.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces aurantiacus JA 4570.;"
ABC transporter-like protein
anamox3_curated_scaffold_576_13
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(14213..15487)
DNA (1275bp) protein (425aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase Tax=Roseiflexus sp. (strain RS-1) RepID=SYS_ROSS1
Tax=RBG_13_Chloroflexi_68_17_curated
anamox3_curated_scaffold_576_14

Not on your lists

comp(15491..15997)
DNA (507bp) protein (169aa)
Uncharacterized protein {ECO:0000313|EMBL:KKK51680.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
NUDIX hydrolase bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
NUDIX hydrolase
anamox3_curated_scaffold_576_15
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

comp(15994..17451)
DNA (1458bp) protein (486aa)
Lysine--tRNA ligase Tax=uncultured candidate division OP1 bacterium RepID=H5SC73_9BACT
lysyl-tRNA synthetase
Tax=RBG_16_Chloroflexi_64_32_curated
anamox3_curated_scaffold_576_16
RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(17539..18006)
DNA (468bp) protein (156aa)
transcription elongation factor GreA bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
transcription elongation factor GreA
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated
anamox3_curated_scaffold_576_17
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

18133..19413
DNA (1281bp) protein (427aa)
Peptidase S1 family protein Tax=Gordonia sputi NBRC 100414 RepID=H5U3A4_9ACTO
2-alkenal reductase
Tax=RBG_13_Chloroflexi_66_10_curated
anamox3_curated_scaffold_576_18
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

19447..21150
DNA (1704bp) protein (568aa)
hypothetical protein Tax=Amycolatopsis benzoatilytica RepID=UPI0003765D11
hypothetical protein
Tax=RBG_16_Chloroflexi_64_32_curated
anamox3_curated_scaffold_576_19
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21153..21719
DNA (567bp) protein (189aa)
Methyltransferase Tax=Anaeromyxobacter sp. (strain K) RepID=B4UCU4_ANASK
methyltransferase
Methyltransferase {ECO:0000313|EMBL:ACG73341.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain K).;"
anamox3_curated_scaffold_576_20
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

21716..22198
DNA (483bp) protein (161aa)
pantetheine-phosphate adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LVP3_DESBD bin=16ft_combo_ws3_JS1 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_Chloroflexi_68_14_curated
anamox3_curated_scaffold_576_21
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

22223..22735
DNA (513bp) protein (171aa)
Putative uncharacterized protein Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N543_ANATU
hypothetical protein
Tax=RBG_16_Chloroflexi_68_14_curated
anamox3_curated_scaffold_576_22
unknown

Not on your lists

22863..23117
DNA (255bp) protein (85aa)

This feature has no annotations

anamox3_curated_scaffold_576_23
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(23195..23878)
DNA (684bp) protein (228aa)
Uncharacterized protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4J9_SPHTD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ39166.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
anamox3_curated_scaffold_576_24
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists


comp(24045..26489)
DNA (2445bp) protein (815aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
Leucine--tRNA ligase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3Q6_SPHTD
leucyl-tRNA synthetase
anamox3_curated_scaffold_576_25
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

comp(26665..27147)
DNA (483bp) protein (161aa)
MgtC/SapB transporter Tax=Burkholderia multivorans RepID=A9ALM2_BURM1
mgtC; Mg2+ transporter-C (MgtC) family protein
Tax=RBG_16_Chloroflexi_64_32_curated
anamox3_curated_scaffold_576_26
GWC2_OP9X_49_35_curated, OP9X, Bacteria

Not on your lists

comp(27144..27707)
DNA (564bp) protein (188aa)
hypothetical protein bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
Tax=GWC2_OP9X_49_35_curated
anamox3_curated_scaffold_576_27
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27744..29375)
DNA (1632bp) protein (544aa)
Alpha amylase catalytic region Tax=Methylobacterium sp. (strain 4-46) RepID=B0UQP6_METS4
alpha amylase
Alpha amylase catalytic region {ECO:0000313|EMBL:ACA18621.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
anamox3_curated_scaffold_576_28
unknown

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comp(29372..29719)
DNA (348bp) protein (116aa)

This feature has no annotations

anamox3_curated_scaffold_576_29
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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comp(29738..30976)
DNA (1239bp) protein (413aa)
Argininosuccinate synthase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TDM0_9CHLR
argG; argininosuccinate synthase
Tax=RBG_16_Chloroflexi_68_14_curated
anamox3_curated_scaffold_576_30
Dehalobacter sp. CF, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31042..31398)
DNA (357bp) protein (119aa)
hypothetical protein Tax=Dehalobacter sp. FTH1 RepID=UPI0003653766
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFV06707.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter sp. CF.;"
Displaying items 1-30 of 39 in total

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