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anamox3_curated_scaffold_1895

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox3_curated_scaffold_1895_1
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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2..1144
DNA (1143bp) protein (381aa)
Membrane-bound lytic murein transglycosylase D bin=GWF2_Ignavibacteria_33_9 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
membrane-bound lytic murein transglycosylase D
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1895_2
unknown

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1547..1735
DNA (189bp) protein (63aa)

This feature has no annotations

anamox3_curated_scaffold_1895_3
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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comp(1913..2860)
DNA (948bp) protein (316aa)
Ribosomal RNA small subunit methyltransferase H bin=GWF2_Ignavibacteria_33_9 species=Caldicellulosiruptor saccharolyticus genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
16S rRNA m(4)C1402 methyltransferase
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1895_4
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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comp(2857..3303)
DNA (447bp) protein (149aa)
Protein MraZ bin=GWA2_Ignavibacteria-rel_35_8 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
mraZ; protein MraZ
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1895_5
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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comp(3641..4780)
DNA (1140bp) protein (380aa)
Response regulator receiver sensor signal transduction histidine kinase bin=GWB1_CP_36_13 species=Clostridium saccharoperbutylacetonicum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
histidine kinase
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1895_6
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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4891..6933
DNA (2043bp) protein (681aa)
UvrABC system protein B bin=GWB2_Ignavibacteria_35_12 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
excinuclease ABC, B subunit
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox3_curated_scaffold_1895_7
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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6934..7602
DNA (669bp) protein (223aa)
Chromosome undetermined scaffold_38, whole genome shotgun sequence bin=GWF2_Ignavibacteria_33_9 species=Paramecium tetraurelia genus=Paramecium taxon_order=Peniculida taxon_class=Oligohymenophorea phylum=unknown tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
tRNA (guanine-N(7)-)-methyltransferase
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1895_8
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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comp(7952..8590)
DNA (639bp) protein (213aa)
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1895_9
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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comp(8591..9097)
DNA (507bp) protein (169aa)
Peptide methionine sulfoxide reductase MsrB Tax=Leptospira borgpetersenii RepID=K8M0Q8_LEPBO
methionine-R-sulfoxide reductase
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1895_10
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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9237..11168
DNA (1932bp) protein (644aa)
Threonine--tRNA ligase bin=GWB2_Ignavibacteria_35_12 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
thrS; threonyl-tRNA synthetase
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1895_11
RBG_13_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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11404..11841
DNA (438bp) protein (146aa)
Transcriptional regulator, BadM/Rrf2 family Tax=Melioribacter roseus (strain P3M) RepID=I6YV91_MELRP
transcriptional regulator, BadM/Rrf2 family
Tax=RBG_13_Ignavibacteria_36_8_curated
anamox3_curated_scaffold_1895_12
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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11851..12507
DNA (657bp) protein (219aa)
Cytochrome c nitrite reductase, membrane subunit NrfH bin=GWC2_Ignavibacteria_38_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
cytochrome c nitrate reductase, small subunit
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
anamox3_curated_scaffold_1895_13
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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12529..14019
DNA (1491bp) protein (497aa)
ial:IALB_0861 nrfA; Formate-dependent nitrite reductase cytochrome c552 subunit; K03385 cytochrome c-552 [EC:1.7.2.2] bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
Cytochrome c-552 {ECO:0000256|SAAS:SAAS00233541}; EC=1.-.-.- {ECO:0000256|SAAS:SAAS00275652};; EC=1.7.2.2 {ECO:0000256|SAAS:SAAS00233490};; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
nrfA; Formate-dependent nitrite reductase cytochrome c552 subunit
anamox3_curated_scaffold_1895_14
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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comp(14125..15381)
DNA (1257bp) protein (419aa)
Ribonuclease Y bin=GWF2_Ignavibacteria_33_9 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
2',3'-cyclic-nucleotide 2'-phosphodiesterase
Tax=BJP_IG2069_Ignavibacteriae_38_11
Displaying 14 items

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