ggKbase home page

anamox3_curatedSub10_scaffold_31

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox3_curatedSub10_scaffold_31_1
unknown

Not on your lists

2..94
DNA (93bp) protein (31aa)

This feature has no annotations

anamox3_curatedSub10_scaffold_31_2
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(383..2842)
DNA (2460bp) protein (820aa)
Outer membrane receptor protein Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AME1_IGNAJ
Outer membrane receptor protein
Tax=BJP_IG2103_Bacteroidetes_41_9
anamox3_curatedSub10_scaffold_31_3
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

3046..4245
DNA (1200bp) protein (400aa)
Efflux transporter, RND family, MFP subunit bin=GWC2_Ignavibacteria_38_9 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
RND family efflux transporter, MFP subunit
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
anamox3_curatedSub10_scaffold_31_4
RBG_13_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

4258..4941
DNA (684bp) protein (228aa)
ABC transporter ATP-binding protein bin=GWF2_Melioribacter_38_21 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
ABC transporter-like protein
Tax=RBG_13_Ignavibacteria_36_8_curated
anamox3_curatedSub10_scaffold_31_5
GWB2_Ignavibacteria_35_6b_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

4938..6098
DNA (1161bp) protein (387aa)
Putative uncharacterized protein bin=GWF2_Melioribacter_38_21 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
ABC transporter membrane protein
Tax=GWB2_Ignavibacteria_35_6b_curated
anamox3_curatedSub10_scaffold_31_6
RBG_13_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

6174..7340
DNA (1167bp) protein (389aa)
Efflux ABC transporter, permease protein bin=GWA2_Ignavibacteria_55_11 species=Janthinobacterium sp. HH01 genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
hypothetical protein
Tax=RBG_13_Ignavibacteria_36_8_curated
anamox3_curatedSub10_scaffold_31_7
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

7584..9125
DNA (1542bp) protein (514aa)
Uncharacterized protein Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AN08_IGNAJ
hypothetical protein
Tax=GWC2_Ignavibacteria_rel_36_12_curated
anamox3_curatedSub10_scaffold_31_8
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

9163..10167
DNA (1005bp) protein (335aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
Tax=GWC2_Ignavibacteria_rel_36_12_curated
anamox3_curatedSub10_scaffold_31_9
Crocosphaera watsonii, Crocosphaera, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(10236..10598)
DNA (363bp) protein (121aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Crocosphaera.;" source="Crocosphaera watsonii WH 0401.;"
mRNA interferase Tax=Crocosphaera watsonii WH 0401 RepID=T2J530_CROWT
transcriptional modulator of MazE/toxin MazF
anamox3_curatedSub10_scaffold_31_10
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10585..11775)
DNA (1191bp) protein (397aa)
Helix-turn-helix domain protein Tax=Oscillochloris trichoides DG-6 RepID=E1IIM0_9CHLR
hypothetical protein
Tax=RBG_16_Gammaproteobacteria_51_14_curated
anamox3_curatedSub10_scaffold_31_11
Treponema brennaborense, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(12068..14065)
DNA (1998bp) protein (666aa)
HI0933 family protein Tax=Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3) RepID=F4LKL8_TREBD
hypothetical protein
HI0933 family protein {ECO:0000313|EMBL:AEE17574.1}; species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3).;"
anamox3_curatedSub10_scaffold_31_12
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14100..16022)
DNA (1923bp) protein (641aa)
UPI0003D1B97D related cluster Tax=unknown RepID=UPI0003D1B97D
PAS domain S-box {ECO:0000313|EMBL:ETA69457.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus tindarius DSM 2278.;"
multi-sensor hybrid histidine kinase
anamox3_curatedSub10_scaffold_31_13
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

16270..18939
DNA (2670bp) protein (890aa)
Pyruvate dehydrogenase E1 component bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
aceE; pyruvate dehydrogenase E1 component
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
anamox3_curatedSub10_scaffold_31_14
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

18956..20830
DNA (1875bp) protein (625aa)
Dihydrolipoamide acetyltransferase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IMV8_KORVE
dihydrolipoamide acetyltransferase
Dihydrolipoamide acetyltransferase {ECO:0000313|EMBL:ABF41792.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
anamox3_curatedSub10_scaffold_31_15
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

20841..22253
DNA (1413bp) protein (471aa)
ial:IALB_2982 pdhD; Pyruvate dehydrogenase E3 component; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
pdhD; pyruvate dehydrogenase E3 component
Tax=GWC2_Ignavibacteria_rel_36_12_curated
anamox3_curatedSub10_scaffold_31_16
Oscillatoriales cyanobacterium JSC-12, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

22598..24541
DNA (1944bp) protein (648aa)
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component alpha subunit Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GIH8_9CYAN
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component alpha subunit {ECO:0000313|EMBL:EKQ68375.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales.;" source="Oscillatoriales cyanobacterium JSC-12.;"
hypothetical protein
anamox3_curatedSub10_scaffold_31_17
CG_Ignavi_01, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

24775..27033
DNA (2259bp) protein (753aa)
Aconitase A Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ANL8_IGNAJ
acnA; aconitase
Tax=CG_Ignavi_01
anamox3_curatedSub10_scaffold_31_18
unknown

Not on your lists

27156..27302
DNA (147bp) protein (49aa)

This feature has no annotations

anamox3_curatedSub10_scaffold_31_19
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

27306..29528
DNA (2223bp) protein (741aa)
ial:IALB_2870 hypothetical protein bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_16_Ignavibacteria_34_14_curated
anamox3_curatedSub10_scaffold_31_20
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

29692..32469
DNA (2778bp) protein (926aa)
ial:IALB_0486 Outer membrane receptor protein bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
Outer membrane receptor protein
Tax=CG_Ignavi_02
anamox3_curatedSub10_scaffold_31_21
CG_Ignavi_01, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

32484..35996
DNA (3513bp) protein (1171aa)
ial:IALB_0487 hypothetical protein bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Tax=CG_Ignavi_01
anamox3_curatedSub10_scaffold_31_22
CG_Ignavi_01, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

36011..37018
DNA (1008bp) protein (336aa)
Putative uncharacterized protein Tax=Caldithrix abyssi DSM 13497 RepID=H1XWI9_9BACT
hypothetical protein
Tax=CG_Ignavi_01
anamox3_curatedSub10_scaffold_31_23
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

37083..38531
DNA (1449bp) protein (483aa)
hypothetical protein bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Tax=CG_Ignavi_02
anamox3_curatedSub10_scaffold_31_24
CG_Ignavi_01, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(39326..41182)
DNA (1857bp) protein (619aa)
Tetratricopeptide repeat domain protein bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
tetratricopeptide repeat domain protein
Tax=CG_Ignavi_01
anamox3_curatedSub10_scaffold_31_25
CG_Ignavi_01, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

41257..43125
DNA (1869bp) protein (623aa)
ial:IALB_2729 hypothetical protein bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Tax=CG_Ignavi_01
anamox3_curatedSub10_scaffold_31_26
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(43361..44083)
DNA (723bp) protein (241aa)
Uncharacterized protein bin=GWC2_Ignavibacteria_38_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
hypothetical protein
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
anamox3_curatedSub10_scaffold_31_27
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

44229..45785
DNA (1557bp) protein (519aa)
Electron transport complex protein RnfC Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AG58_IGNAJ
rnfC; electron transport complex protein RnfC
Electron transport complex subunit C {ECO:0000256|HAMAP-Rule:MF_00461}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
anamox3_curatedSub10_scaffold_31_28
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

45787..46767
DNA (981bp) protein (327aa)
ial:IALB_0252 rnfD; Electron transport complex protein RnfD; K03614 electron transport complex protein RnfD bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
electron transport complex, RnfABCDGE type, D subunit
Tax=BJP_IG2102_Ignavibacteriales_35_8
anamox3_curatedSub10_scaffold_31_29
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

46764..47324
DNA (561bp) protein (187aa)
rnfG; Electron transport complex protein RnfG; K03612 electron transport complex protein RnfG bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
rnfG; electron transport complex protein RnfG
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curatedSub10_scaffold_31_30
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

47321..48031
DNA (711bp) protein (237aa)
ial:IALB_0250 rnfE; Electron transport complex protein RnfE; K03613 electron transport complex protein RnfE bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
rnfE; electron transport complex protein RnfE
Tax=CG_Ignavi_02
Displaying items 1-30 of 43 in total

View Taxonomy