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anamox4_curated_scaffold_43

Search features with annotation key words

Displaying items 61-90 of 145 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox4_curated_scaffold_43_61
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67043..68047
-----------------
DNA (1005bp)
protein (335aa)
Patatin Tax=Methylocystis sp. (strain SC2) RepID=J7QMA6_METSZ
Esterase (Alpha-beta hydrolase superfamily) {ECO:0000313|EMBL:EYF01966.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
patatin
anamox4_curated_scaffold_43_62
Bacillus clausii, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

68211..69989
-----------------
DNA (1779bp)
protein (593aa)
acyl-CoA dehydrogenase (EC:1.3.99.-)
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:BAD65522.1}; EC=1.3.99.- {ECO:0000313|EMBL:BAD65522.1};; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus clausii (strain KSM-K16).;"
Acyl-CoA dehydrogenase Tax=Bacillus clausii (strain KSM-K16) RepID=Q5WDN8_BACSK
anamox4_curated_scaffold_43_63
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(70011..72239)
-----------------
DNA (2229bp)
protein (743aa)
Multi-sensor hybrid histidine kinase Tax=Chthoniobacter flavus Ellin428 RepID=B4D4Q8_9BACT
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:EDY18511.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
multi-sensor hybrid histidine kinase
anamox4_curated_scaffold_43_64
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(72367..72807)
-----------------
DNA (441bp)
protein (147aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2PQ96_9ACTO
fmn flavoprotein
Tax=RBG_16_Acidobacteria_68_9_curated
anamox4_curated_scaffold_43_65
Synechococcus elongatus, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

72949..73686
-----------------
DNA (738bp)
protein (246aa)
Carboxymethylenebutenolidase {ECO:0000313|EMBL:ABB56121.1}; EC=3.1.1.45 {ECO:0000313|EMBL:ABB56121.1};; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus elongatus (strain PCC 7942) (Anacystis nidulans R2).;"
Carboxymethylenebutenolidase Tax=Synechococcus elongatus RepID=Q31S48_SYNE7
carboxymethylenebutenolidase
anamox4_curated_scaffold_43_66
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

73732..75345
-----------------
DNA (1614bp)
protein (538aa)
propionyl-CoA carboxylase (EC:6.4.1.3); K15052 propionyl-CoA carboxylase [EC:6.4.1.3] bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
carboxyl transferase domain protein
Tax=RBG_16_RIF_WS3X_71_46_curated
anamox4_curated_scaffold_43_67
Thioalkalivibrio nitratireducens, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

75479..75916
-----------------
DNA (438bp)
protein (146aa)
CBS domain containing membrane protein Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0DTT3_THIND
yhcV_[H]; CBS domain containing membrane protein
CBS domain containing membrane protein {ECO:0000313|EMBL:AGA33014.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 /; ALEN2).;"
anamox4_curated_scaffold_43_68
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(75937..77877)
-----------------
DNA (1941bp)
protein (647aa)
Alpha/beta hydrolase fold protein Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SB32_GEOOG
Hydrolase {ECO:0000313|EMBL:EWS99740.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
alpha/beta hydrolase fold protein
anamox4_curated_scaffold_43_69
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

78007..78696
-----------------
DNA (690bp)
protein (230aa)
Cytochrome c subfamily, putative Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JH90_9BACT
Cytochrome c subfamily, putative {ECO:0000313|EMBL:EDY83139.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium DG1235.;"
cytochrome c oxidase subunit II
anamox4_curated_scaffold_43_70
unknown

Not on your lists

78693..78797
-----------------
DNA (105bp)
protein (35aa)

This feature has no annotations

anamox4_curated_scaffold_43_71

Not on your lists

78817..79512
-----------------
DNA (696bp)
protein (232aa)
cytochrome c oxidase subunit II (EC:1.9.3.1)
Marine sediment metagenome DNA, contig: S01H1_S08270 {ECO:0000313|EMBL:GAG06962.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
cytochrome c oxidase, subunit II bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
anamox4_curated_scaffold_43_72
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

79509..81227
-----------------
DNA (1719bp)
protein (573aa)
cytochrome c oxidase, subunit I (EC:1.9.3.1) bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cytochrome c oxidase, subunit I (EC:1.9.3.1)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
anamox4_curated_scaffold_43_73
GWA2_Deltaproteobacteria_45_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81224..81820
-----------------
DNA (597bp)
protein (199aa)
Cytochrome c oxidase, subunit III bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Cytochrome c oxidase, subunit III
Tax=GWA2_Deltaproteobacteria_45_12_curated
anamox4_curated_scaffold_43_74
GWA2_Deltaproteobacteria_45_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81831..82175
-----------------
DNA (345bp)
protein (115aa)
caa(3)-type oxidase subunit IV bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=GWA2_Deltaproteobacteria_45_12_curated
anamox4_curated_scaffold_43_75
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82189..82785
-----------------
DNA (597bp)
protein (199aa)
Cytochrome c oxidase subunit III subfamily Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JH84_9BACT
cytochrome c oxidase subunit III
Tax=RBG_16_Deltaproteobacteria_71_12_curated
anamox4_curated_scaffold_43_76
unknown

Not on your lists

82782..83090
-----------------
DNA (309bp)
protein (103aa)

This feature has no annotations

anamox4_curated_scaffold_43_77
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(83189..84454)
-----------------
DNA (1266bp)
protein (422aa)
Putative aspartate transaminase {ECO:0000313|EMBL:CDI01595.1}; EC=2.6.1.1 {ECO:0000313|EMBL:CDI01595.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
class I and II aminotransferase (EC:2.6.1.-)
aminotransferase Tax=Leeia oryzae RepID=UPI0003752324
anamox4_curated_scaffold_43_78
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84511..87294)
-----------------
DNA (2784bp)
protein (928aa)
Sensory box histidine kinase/response regulator Tax=Synechococcus sp. (strain JA-3-3Ab) RepID=Q2JR31_SYNJA
Uncharacterized protein {ECO:0000313|EMBL:ETX02830.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
sensory box histidine kinase/response regulator
anamox4_curated_scaffold_43_79
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

87482..88366
-----------------
DNA (885bp)
protein (295aa)
Predicted membrane protein Tax=Microbacterium testaceum (strain StLB037) RepID=E8NA79_MICTS
Uncharacterized protein {ECO:0000313|EMBL:KDA05829.1}; species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein
anamox4_curated_scaffold_43_80
Mycobacterium mageritense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

88542..89948
-----------------
DNA (1407bp)
protein (469aa)
hypothetical protein Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=UPI0002D29A8D
Amidase {ECO:0000313|EMBL:CDO20440.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium mageritense.;"
amidase
anamox4_curated_scaffold_43_81
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(90018..91514)
-----------------
DNA (1497bp)
protein (499aa)
hypothetical protein Tax=Dehalobacter sp. FTH1 RepID=UPI00036C1ED6
hypothetical protein
Tax=CG_Arma_01
anamox4_curated_scaffold_43_82
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(91656..92267)
-----------------
DNA (612bp)
protein (204aa)
Uncharacterized protein Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UMR7_MYXSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC47764.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
anamox4_curated_scaffold_43_83
GWD2_Desulfuromonadales_61_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(92351..93367)
-----------------
DNA (1017bp)
protein (339aa)
glycerol-3-phosphate dehydrogenase (NAD(P)(+)) (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] bin=GWB2_Deltaproteobacteria_65_81 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=GWD2_Desulfuromonadales_61_12_curated
anamox4_curated_scaffold_43_84
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

93497..94705
-----------------
DNA (1209bp)
protein (403aa)
Uncharacterized protein Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2TYY4_9DELT
Uncharacterized protein {ECO:0000313|EMBL:ERK87713.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus sp. (contaminant ex DSM 436).;"
putative multidrug resistance protein
anamox4_curated_scaffold_43_85
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

94702..95343
-----------------
DNA (642bp)
protein (214aa)
dienelactone hydrolase; K07020 bin=bin9_gal15 species=Arthrobacter sp. genus=Arthrobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
hypothetical protein
Tax=CSP1_3_Armatimonadetes
anamox4_curated_scaffold_43_86
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

Not on your lists

95390..96919
-----------------
DNA (1530bp)
protein (510aa)
carbamoyl-phosphate synthase L chain ATP-binding protein (EC:6.4.1.1)
Biotin carboxylase bin=GWB2_Chloroflexi_54_36 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
Tax=GWB2_Chloroflexi_54_36_curated
anamox4_curated_scaffold_43_87

Not on your lists

96916..97410
-----------------
DNA (495bp)
protein (165aa)
hypothetical protein Tax=Actinokineospora enzanensis RepID=UPI00035DD38D
Uncharacterized protein {ECO:0000313|EMBL:KKN83492.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
carbamoyl-phosphate synthase L chain ATP-binding protein
anamox4_curated_scaffold_43_88
GWC2_Syntrophus_56_31_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97469..98386)
-----------------
DNA (918bp)
protein (306aa)
formyltetrahydrofolate dehydrogenase (EC:1.5.1.6)
Formyltetrahydrofolate dehydrogenase bin=GWC2_Syntrophus__56_31 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=GWC2_Syntrophus_56_31_curated
anamox4_curated_scaffold_43_89
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

98596..99210
-----------------
DNA (615bp)
protein (205aa)
Transcriptional regulator PadR-like family protein bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
transcriptional regulator
Tax=GWC2_Nitrospirae_56_14_curated
anamox4_curated_scaffold_43_90
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

99401..100180
-----------------
DNA (780bp)
protein (260aa)
Transcriptional regulator, IclR family bin=GWC2_Pelobacter_58_13 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
IclR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
Displaying items 61-90 of 145 in total

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