ggKbase home page

anamox4_curated_scaffold_562

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox4_curated_scaffold_562_1
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

76..1323
DNA (1248bp) protein (416aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PER6_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK41725.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_562_2

Not on your lists

1363..2649
DNA (1287bp) protein (429aa)
Branched chain amino acid ABC transporter substrate-binding protein Tax=uncultured bacterium A1Q1_fos_560 RepID=L7VXH4_9BACT
Branched chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:AGC72146.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_560.;"
putative extracellular ligand-binding receptor
anamox4_curated_scaffold_562_3
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2750..3568
DNA (819bp) protein (273aa)
Uncharacterized protein Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GFI1_NITSI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEJ01161.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. (strain Is79A3).;"
anamox4_curated_scaffold_562_4
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3565..5238
DNA (1674bp) protein (558aa)
Amidohydrolase Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GFI2_NITSI
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:AEJ01162.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. (strain Is79A3).;"
anamox4_curated_scaffold_562_5
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

5442..6566
DNA (1125bp) protein (375aa)
fbpV; fructose-1,6-bisphosphatase, class V (EC:3.1.3.11)
Fructose-1,6-bisphosphatase, class V {ECO:0000313|EMBL:CBK41751.1}; EC=3.1.3.11 {ECO:0000313|EMBL:CBK41751.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Fructose-1,6-bisphosphatase, class V Tax=Candidatus Nitrospira defluvii RepID=D8PEU2_9BACT
anamox4_curated_scaffold_562_6
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

6700..7110
DNA (411bp) protein (137aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PEU4_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK41753.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_562_7
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

7122..7808
DNA (687bp) protein (229aa)
Putative lipoprotein, RlpA-like Tax=Candidatus Nitrospira defluvii RepID=D8PEU5_9BACT
putative lipoprotein
Putative lipoprotein, RlpA-like {ECO:0000313|EMBL:CBK41754.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_562_8
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

8037..9350
DNA (1314bp) protein (438aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PEU6_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK41755.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_562_9
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(9325..11337)
DNA (2013bp) protein (671aa)
ligA; DNA ligase (NAD(+)) (EC:6.5.1.2)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
DNA ligase Tax=Candidatus Nitrospira defluvii RepID=D8PEU7_9BACT
anamox4_curated_scaffold_562_10
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(11343..13244)
DNA (1902bp) protein (634aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PEU8_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK41757.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_562_11
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(13241..14194)
DNA (954bp) protein (318aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PEU9_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK41758.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_562_12
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

14379..15059
DNA (681bp) protein (227aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PEV0_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK41759.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_562_13
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

15078..16574
DNA (1497bp) protein (499aa)
trpE; anthranilate synthase, component I (EC:4.1.3.27)
Anthranilate synthase, component I {ECO:0000313|EMBL:CBK41760.1}; EC=4.1.3.27 {ECO:0000313|EMBL:CBK41760.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Anthranilate synthase, component I Tax=Candidatus Nitrospira defluvii RepID=D8PEV1_9BACT
anamox4_curated_scaffold_562_14
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

16626..17189
DNA (564bp) protein (188aa)
trpG; anthranilate synthase, component II (EC:4.1.3.27)
Anthranilate synthase, component II {ECO:0000313|EMBL:CBK41761.1}; EC=4.1.3.27 {ECO:0000313|EMBL:CBK41761.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Anthranilate synthase, component II Tax=Candidatus Nitrospira defluvii RepID=D8PEV2_9BACT
anamox4_curated_scaffold_562_15
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

17212..18279
DNA (1068bp) protein (356aa)
trpD; anthranilate phosphoribosyltransferase (EC:2.4.2.18)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Anthranilate phosphoribosyltransferase Tax=Candidatus Nitrospira defluvii RepID=D8PEV3_9BACT
anamox4_curated_scaffold_562_16
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

18251..19075
DNA (825bp) protein (275aa)
trpC; indole-3-glycerol phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046689}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046705};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Indole-3-glycerol phosphate synthase Tax=Candidatus Nitrospira defluvii RepID=D8PEV4_9BACT
anamox4_curated_scaffold_562_17
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

19072..19386
DNA (315bp) protein (105aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PEV5_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK41764.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_562_18
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

19391..20023
DNA (633bp) protein (211aa)
trpF; n-(5'-phosphoribosyl)anthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
N-(5'-phosphoribosyl)anthranilate isomerase Tax=Candidatus Nitrospira defluvii RepID=D8PEV6_9BACT
anamox4_curated_scaffold_562_19
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

20072..21262
DNA (1191bp) protein (397aa)
trpB; tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133, ECO:0000313|EMBL:CBK41766.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Tryptophan synthase beta chain Tax=Candidatus Nitrospira defluvii RepID=D8PEV7_9BACT
anamox4_curated_scaffold_562_20
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

21259..22119
DNA (861bp) protein (287aa)
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Tryptophan synthase alpha chain Tax=Candidatus Nitrospira defluvii RepID=D8PEV8_9BACT
anamox4_curated_scaffold_562_21
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

22258..23301
DNA (1044bp) protein (348aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PEV9_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK41768.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_562_22
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(23328..23933)
DNA (606bp) protein (202aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PEW0_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK41769.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_562_23
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(23977..25149)
DNA (1173bp) protein (391aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PEW1_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK41770.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_562_24
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(25212..25880)
DNA (669bp) protein (223aa)
lolD; lipoprotein-releasing system, ATP-binding protein lolD (EC:3.6.3.-)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708, ECO:0000313|EMBL:CBK41771.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Lipoprotein-releasing system, ATP-binding protein LolD Tax=Candidatus Nitrospira defluvii RepID=D8PEW2_9BACT
anamox4_curated_scaffold_562_25
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(25893..27170)
DNA (1278bp) protein (426aa)
Lipoprotein-releasing system, transmembrane protein LolC Tax=Candidatus Nitrospira defluvii RepID=D8PEW3_9BACT
lolC; lipoprotein-releasing system, transmembrane protein lolC
Lipoprotein-releasing system, transmembrane protein LolC {ECO:0000313|EMBL:CBK41772.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_562_26
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(27173..28654)
DNA (1482bp) protein (494aa)
lysS; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Lysine--tRNA ligase Tax=Candidatus Nitrospira defluvii RepID=D8PEW4_9BACT
anamox4_curated_scaffold_562_27
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(28673..29683)
DNA (1011bp) protein (337aa)
Peptide chain release factor 2 Tax=Candidatus Nitrospira defluvii RepID=D8PEW5_9BACT
prfB; peptide chain release factor 2
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Displaying 27 items

View Taxonomy