ggKbase home page

anamox4_curated_scaffold_377

Search features with annotation key words

Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox4_curated_scaffold_377_1
Desulfitobacterium dehalogenans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

283..684
DNA (402bp) protein (134aa)
Lactoylglutathione lyase-like lyase Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4AAK6_DESDJ
lactoylglutathione lyase-like lyase
Lactoylglutathione lyase-like lyase {ECO:0000313|EMBL:AFM00991.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 /; JW/IU-DC1).;"
anamox4_curated_scaffold_377_2
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

704..1699
DNA (996bp) protein (332aa)
Glycosidase PH1107-related Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AYF7_HERA2
glycosidase-like protein
Glycosidase PH1107-related {ECO:0000313|EMBL:ABX03539.1}; species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
anamox4_curated_scaffold_377_3
unknown

Not on your lists

1827..2066
DNA (240bp) protein (80aa)

This feature has no annotations

anamox4_curated_scaffold_377_4
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

2594..8083
DNA (5490bp) protein (1830aa)
hypothetical protein Tax=Pseudomonas fragi RepID=UPI0003164A1A
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
anamox4_curated_scaffold_377_5
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

8226..9605
DNA (1380bp) protein (460aa)
Uncharacterized protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I280_CALAS
hypothetical protein
Tax=RBG_13_Chloroflexi_68_17_curated
anamox4_curated_scaffold_377_6
Treponema succinifaciens, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

9733..9996
DNA (264bp) protein (88aa)
Glycosyltransferase 36 Tax=Treponema succinifaciens (strain ATCC 33096 / DSM 2489 / 6091) RepID=F2NU55_TRES6
glycosyltransferase
Glycosyltransferase 36 {ECO:0000313|EMBL:AEB13019.1}; species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema succinifaciens (strain ATCC 33096 / DSM 2489 / 6091).;"
anamox4_curated_scaffold_377_7

Not on your lists

10024..10371
DNA (348bp) protein (116aa)
ORF1 Tax=uncultured bacterial symbiont of Discodermia dissoluta RepID=Q49HJ0_9BACT
hypothetical protein
ORF1 {ECO:0000313|EMBL:AAY00036.1}; ORF12 {ECO:0000313|EMBL:AAY00047.1}; ORF14 {ECO:0000313|EMBL:AAY00049.1}; species="Bacteria; environmental samples.;" source="uncultured bacterial symbiont of Discodermia dissoluta.;"
anamox4_curated_scaffold_377_8
CG_Syntroph_02, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10393..10932
DNA (540bp) protein (180aa)
Uncharacterized protein Tax=Leptolyngbya sp. PCC 7375 RepID=K9EVD3_9CYAN
hypothetical protein
Tax=CG_Syntroph_02
anamox4_curated_scaffold_377_9
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(10907..12259)
DNA (1353bp) protein (451aa)
Uncharacterized protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I168_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL99005.1}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
anamox4_curated_scaffold_377_10
RBG_13_Chloroflexi_60_9_curated, Chloroflexi, Bacteria

Not on your lists

12851..15463
DNA (2613bp) protein (871aa)
Uncharacterized protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I279_CALAS
hypothetical protein
Tax=RBG_13_Chloroflexi_60_9_curated
anamox4_curated_scaffold_377_11
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

15460..16818
DNA (1359bp) protein (453aa)
Beta-glucosidase {ECO:0000256|RuleBase:RU361175}; EC=3.2.1.21 {ECO:0000256|RuleBase:RU361175};; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
Putative beta-glucosidase Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0HYI5_CALAS
putative beta-glucosidase
anamox4_curated_scaffold_377_12
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17225..17974
DNA (750bp) protein (250aa)
hypothetical protein Tax=Meiothermus timidus RepID=UPI000360CF93
Transcriptional regulator {ECO:0000313|EMBL:EJC85047.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2297.;"
GntR family transcriptional regulator
anamox4_curated_scaffold_377_13
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

18000..19004
DNA (1005bp) protein (335aa)
Putative oligopeptide ABC transporter ATP-binding protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I1L4_CALAS
putative oligopeptide ABC transporter ATP-binding protein
Tax=RBG_13_Chloroflexi_68_17_curated
anamox4_curated_scaffold_377_14
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

19001..20026
DNA (1026bp) protein (342aa)
Putative oligopeptide ABC transporter ATP-binding protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I1L3_CALAS
putative oligopeptide ABC transporter ATP-binding protein
Putative oligopeptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAL99150.1}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
anamox4_curated_scaffold_377_15
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20097..21806
DNA (1710bp) protein (570aa)
UPI0003CE8276 related cluster Tax=unknown RepID=UPI0003CE8276
Uncharacterized protein {ECO:0000313|EMBL:ESY76070.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
dipeptide ABC transporter, periplasmic component
anamox4_curated_scaffold_377_16
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21892..22848
DNA (957bp) protein (319aa)
UPI0003CDD600 related cluster Tax=unknown RepID=UPI0003CDD600
Peptide ABC transporter permease {ECO:0000313|EMBL:ESY75649.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
dipeptide/oligopeptide/nickel ABC transporter permease
anamox4_curated_scaffold_377_17
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22883..23773
DNA (891bp) protein (297aa)
Dipeptide/oligopeptide/nickel ABC transporter, permease component Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y7T8_9RHIZ
Dipeptide/oligopeptide/nickel ABC transporter, permease component {ECO:0000313|EMBL:EHH12172.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
oligopeptide ABC transporter permease
anamox4_curated_scaffold_377_18
Rhodopirellula baltica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

24007..24924
DNA (918bp) protein (306aa)
nanA; N-acetylneuraminate lyase (EC:4.1.3.3)
N-acetylneuraminate lyase Tax=Rhodopirellula baltica WH47 RepID=F2AUR3_RHOBT
N-acetylneuraminate lyase {ECO:0000313|EMBL:EGF26629.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula baltica WH47.;"
anamox4_curated_scaffold_377_19
bacterium UASB270, Bacteria

Not on your lists

24921..26135
DNA (1215bp) protein (405aa)
N-acylglucosamine 2-epimerase {ECO:0000313|EMBL:GAK57622.1}; species="Bacteria.;" source="bacterium UASB270.;"
N-acylglucosamine 2-epimerase bin=GWF2_Lentisphaerae_52_8 species=Opitutaceae bacterium TAV5 genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
N-acylglucosamine 2-epimerase
anamox4_curated_scaffold_377_20
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26234..27202
DNA (969bp) protein (323aa)
ROK family protein Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I0X1_DESAP
ROK family protein
ROK family protein {ECO:0000313|EMBL:ACA58858.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Candidatus Desulforudis.;" source="Desulforudis audaxviator (strain MP104C).;"
anamox4_curated_scaffold_377_21
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

27218..28621
DNA (1404bp) protein (468aa)
atm:ANT_08110 hypothetical protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
anamox4_curated_scaffold_377_22
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

28954..29205
DNA (252bp) protein (84aa)
Putative uncharacterized protein Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NGF4_ROSCS
hypothetical protein
Tax=CG_Anaero_02
anamox4_curated_scaffold_377_23
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

29474..29686
DNA (213bp) protein (71aa)
Putative uncharacterized protein Tax=Chlorobium phaeobacteroides (strain DSM 266) RepID=A1BE76_CHLPD
hypothetical protein
Tax=CG_Anaero_03
anamox4_curated_scaffold_377_24
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

29795..30946
DNA (1152bp) protein (384aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
N-acetylglucosamine-6-phosphate deacetylase Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I8P9_CALAS
nagA; N-acetylglucosamine-6-phosphate deacetylase
anamox4_curated_scaffold_377_25
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

31051..32100
DNA (1050bp) protein (350aa)
Putative sugar isomerase Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I8Q0_CALAS
putative sugar isomerase
Putative sugar isomerase {ECO:0000313|EMBL:BAM01638.1}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
anamox4_curated_scaffold_377_26
Deinococcus phoenicis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

32131..33477
DNA (1347bp) protein (449aa)
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus phoenicis.;"
3-oxoacid CoA-transferase subunit B (EC:2.8.3.5)
succinyl-CoA:3-ketoacid-CoA transferase Tax=Deinococcus apachensis RepID=UPI0003758D4F
anamox4_curated_scaffold_377_27
unknown

Not on your lists

33740..34957
DNA (1218bp) protein (406aa)

This feature has no annotations

anamox4_curated_scaffold_377_28
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(35213..35476)
DNA (264bp) protein (88aa)
Bacterial nucleoid DNA-binding protein Tax=Nostoc sp. (strain ATCC 29411 / PCC 7524) RepID=K9QMK3_NOSS7
nucleoid DNA-binding protein
Tax=RBG_16_Chloroflexi_57_11_curated
anamox4_curated_scaffold_377_29
Methanosarcina sp. 1.H.T.1A.1, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(35637..37460)
DNA (1824bp) protein (608aa)
Putative uncharacterized protein Tax=Thiocapsa marina 5811 RepID=F9UCS7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KKH98178.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 1.H.T.1A.1.;"
hypothetical protein
anamox4_curated_scaffold_377_30
RifOxyB12_full_Planctomycetes_42_10_curated, Planctomycetes, Bacteria

Not on your lists

comp(37861..38082)
DNA (222bp) protein (74aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037A37C9
hypothetical protein
Tax=RifOxyB12_full_Planctomycetes_42_10_curated
Displaying items 1-30 of 71 in total

View Taxonomy