ggKbase home page

anamox4_curated_scaffold_523

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox4_curated_scaffold_523_1
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(255..1535)
DNA (1281bp) protein (427aa)
serS; seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=SYS_THERP
Tax=CG_Anaero_02
anamox4_curated_scaffold_523_2
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(1930..3021)
DNA (1092bp) protein (364aa)
Rod shape-determining protein RodA Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I0R3_CALAS
rodA; rod shape-determining protein RodA
Tax=CG_Anaero_02
anamox4_curated_scaffold_523_3
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(3021..5201)
DNA (2181bp) protein (727aa)
Putative penicillin-binding protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I0R6_CALAS
putative penicillin-binding protein
Tax=CG_Anaero_02
anamox4_curated_scaffold_523_4
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(5210..5713)
DNA (504bp) protein (168aa)
Rod shape-determining protein MreD Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I0R7_CALAS
mreD; rod shape-determining protein MreD
Tax=CG_Anaero_02
anamox4_curated_scaffold_523_5
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(5710..6588)
DNA (879bp) protein (293aa)
Cell shape-determining protein MreC Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I0R8_CALAS
mreC; rod shape-determining protein MreC
Tax=CG_Anaero_02
anamox4_curated_scaffold_523_6
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(6598..7659)
DNA (1062bp) protein (354aa)
Rod shape-determining protein MreB Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I0R9_CALAS
mreB; rod shape-determining protein MreB
Tax=CG_Anaero_02
anamox4_curated_scaffold_523_7
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(7823..9016)
DNA (1194bp) protein (398aa)
Peptidase Tax=Sorangium cellulosum So0157-2 RepID=S4Y8K6_SORCE
peptidase
Tax=RBG_16_Chloroflexi_57_11_curated
anamox4_curated_scaffold_523_8
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(9094..10131)
DNA (1038bp) protein (346aa)
Adenosine deaminase {ECO:0000313|EMBL:EFH81826.1}; EC=3.5.4.4 {ECO:0000313|EMBL:EFH81826.1};; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
Adenosine deaminase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TZ36_9CHLR
add; adenosine deaminase
anamox4_curated_scaffold_523_9
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(10225..10869)
DNA (645bp) protein (215aa)
Pyrimidine 5'-nucleotidase Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B4A5_HERA2
pyrimidine 5'-nucleotidase
Tax=RBG_13_Chloroflexi_68_17_curated
anamox4_curated_scaffold_523_10
BJP_IG2069_Anaerolineales_43_63, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(10905..11714)
DNA (810bp) protein (270aa)
D-aminopeptidase DppA Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RZ85_THEOJ
D-aminopeptidase DppA
Tax=BJP_IG2069_Anaerolineales_43_63
anamox4_curated_scaffold_523_11
Natranaerobius thermophilus, Natranaerobius, Natranaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12057..13076)
DNA (1020bp) protein (340aa)
Electron transfer flavoprotein alpha/beta-subunit Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A634_NATTJ
electron transfer flavoprotein subunit alpha/beta
Electron transfer flavoprotein alpha/beta-subunit {ECO:0000313|EMBL:ACB85451.1}; species="Bacteria; Firmicutes; Clostridia; Natranaerobiales; Natranaerobiaceae; Natranaerobius.;" source="Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 /; JW/NM-WN-LF).;"
anamox4_curated_scaffold_523_12
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13095..13877)
DNA (783bp) protein (261aa)
Electron transfer flavoprotein alpha/beta-subunit Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A635_NATTJ
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP66673.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella glycerini.;"
electron transfer flavoprotein subunit alpha/beta
anamox4_curated_scaffold_523_13
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

comp(13893..15056)
DNA (1164bp) protein (388aa)
Acyl-CoA dehydrogenase domain protein Tax=Chloroflexus RepID=A9WIG2_CHLAA
acyl-CoA dehydrogenase domain-containing protein
Tax=RBG_16_Planctomycetes_43_13_curated
anamox4_curated_scaffold_523_14
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(15771..16910)
DNA (1140bp) protein (380aa)
Butyryl-CoA dehydrogenase Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LHA5_9BACT
mmqC; acyl-CoA dehydrogenase
Tax=RBG_16_Chloroflexi_63_12_curated
anamox4_curated_scaffold_523_15
R_WOR_2_67_20, WOR-2, Bacteria

Not on your lists

comp(17028..17816)
DNA (789bp) protein (263aa)
crotonase Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B31F99
enoyl-CoA hydratase/isomerase
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_67_20_curated
anamox4_curated_scaffold_523_16
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(17921..19150)
DNA (1230bp) protein (410aa)
putative 3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35)
fatty-acid oxidation protein subunit alpha Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B732C6
Tax=CG_Anaero_02
anamox4_curated_scaffold_523_17
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(19290..20501)
DNA (1212bp) protein (404aa)
fadA; 3-ketoacyl-CoA thiolase (EC:2.3.1.16)
3-ketoacyl-CoA thiolase Tax=Candidatus Nitrospira defluvii RepID=D8PHR3_9BACT
Tax=CG_Anaero_02
anamox4_curated_scaffold_523_18
unknown

Not on your lists

21454..22440
DNA (987bp) protein (329aa)

This feature has no annotations

anamox4_curated_scaffold_523_19
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

22539..24413
DNA (1875bp) protein (625aa)
DNA mismatch repair protein MutL Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I099_CALAS
mutL; DNA mismatch repair protein mutL
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
anamox4_curated_scaffold_523_20
Anabaena sp. 90, Anabaena, Nostocales, Cyanobacteria, Bacteria

Not on your lists

24714..24947
DNA (234bp) protein (78aa)
Prevent-host-death protein-like protein Tax=Anabaena sp. 90 RepID=K7W300_9NOST
prevent-host-death protein-like protein
Prevent-host-death protein-like protein {ECO:0000313|EMBL:AFW94119.1}; species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena sp. 90.;"
anamox4_curated_scaffold_523_21
Anabaena variabilis, Anabaena, Nostocales, Cyanobacteria, Bacteria

Not on your lists

24944..25330
DNA (387bp) protein (129aa)
PilT protein-like protein Tax=Anabaena variabilis (strain ATCC 29413 / PCC 7937) RepID=Q3M5U7_ANAVT
PilT protein-like protein
PilT protein-like protein {ECO:0000313|EMBL:ABA23639.1}; species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena variabilis (strain ATCC 29413 / PCC 7937).;"
anamox4_curated_scaffold_523_22
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

25522..26973
DNA (1452bp) protein (484aa)
adenine-specific DNA-methyltransferase (EC:2.1.1.72)
Site-specific DNA-methyltransferase (Adenine-specific) {ECO:0000313|EMBL:AFZ14888.1}; EC=2.1.1.72 {ECO:0000313|EMBL:AFZ14888.1};; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Crinalium.;" source="Crinalium epipsammum PCC 9333.;"
hypothetical protein Tax=Scytonema hofmanni RepID=UPI00034C0E66
anamox4_curated_scaffold_523_23
CSP1_5_NC10, NC10, Bacteria

Not on your lists

27429..28484
DNA (1056bp) protein (352aa)
dfaD; fatty acid desaturase; K10255 omega-6 fatty acid desaturase (delta-12 desaturase) [EC:1.14.19.-] bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
fatty acid desaturase
Tax=CSP1_5_NC10
anamox4_curated_scaffold_523_24
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

28560..29144
DNA (585bp) protein (195aa)
Methyltransferase type 11 Tax=Roseiflexus sp. (strain RS-1) RepID=A5URG8_ROSS1
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ABQ89221.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
anamox4_curated_scaffold_523_25
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

29187..30728
DNA (1542bp) protein (514aa)
Glycosyl transferase family 39 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U346_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:KIF19048.1}; species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
glycosyl transferase family protein
anamox4_curated_scaffold_523_26
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

31476..32579
DNA (1104bp) protein (368aa)
hypothetical protein bin=GWB2_Chloroflexi_49_20 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
Tax=CG_Anaero_02
anamox4_curated_scaffold_523_27
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

32710..33702
DNA (993bp) protein (331aa)
Aldo/keto reductase Tax=Caldithrix abyssi DSM 13497 RepID=H1XVB7_9BACT
Aldo/keto reductase {ECO:0000313|EMBL:EHO40623.1}; species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
putative aldo/keto reductase
anamox4_curated_scaffold_523_28
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34751..35116
DNA (366bp) protein (122aa)
Uncharacterized protein {ECO:0000313|EMBL:EXI78172.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
Putative uncharacterized protein bin=GWC2_Nitrospirae-rel_56_14 species=Nitrosomonas sp. genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
anamox4_curated_scaffold_523_29
RBG_16_Chloroflexi_54_11_curated, Chloroflexi, Bacteria

Not on your lists

35345..35689
DNA (345bp) protein (115aa)
SdpI/YhfL protein family Tax=Chthonomonas calidirosea T49 RepID=S0EXN8_9BACT
SdpI/YhfL protein family
Tax=RBG_16_Chloroflexi_54_11_curated
anamox4_curated_scaffold_523_30
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

35969..36841
DNA (873bp) protein (291aa)
Tryptophan synthase alpha chain Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I674_CALAS
trpA; tryptophan synthase alpha chain
Tax=CG_Anaero_02
Displaying items 1-30 of 53 in total

View Taxonomy