ggKbase home page

14_0903_02_30cm_scaffold_468

Search features with annotation key words

Displaying items 1-30 of 49 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0903_02_30cm_scaffold_468_1
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

28..1470
DNA (1443bp) protein (481aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI00036D6286
transcriptional activator domain-containing protein
Tax=RBG_16_Acidobacteria_68_9_curated
14_0903_02_30cm_scaffold_468_2
unknown

Not on your lists

1559..2710
DNA (1152bp) protein (384aa)

This feature has no annotations

14_0903_02_30cm_scaffold_468_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(2703..3677)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABD2_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_0903_02_30cm_scaffold_468_4
unknown

Not on your lists

comp(4492..4635)
DNA (144bp) protein (48aa)

This feature has no annotations

14_0903_02_30cm_scaffold_468_5
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4635..5063)
DNA (429bp) protein (143aa)
DNA-binding response regulator n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U7N5_MYXSD
DNA-binding response regulator
DNA-binding response regulator {ECO:0000313|EMBL:AGC42484.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
14_0903_02_30cm_scaffold_468_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(5206..5946)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABD3_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_0903_02_30cm_scaffold_468_7
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5943..7184)
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. KH32C RepID=H0Q1Y6_9RHOO
hypothetical protein
Tax=CG_Solirubrobact_01
14_0903_02_30cm_scaffold_468_8
unknown

Not on your lists

7499..7780
DNA (282bp) protein (94aa)

This feature has no annotations

14_0903_02_30cm_scaffold_468_9
unknown

Not on your lists

comp(7948..8124)
DNA (177bp) protein (59aa)

This feature has no annotations

14_0903_02_30cm_scaffold_468_10
unknown

Not on your lists

comp(8324..9241)
DNA (918bp) protein (306aa)

This feature has no annotations

14_0903_02_30cm_scaffold_468_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(9465..9890)
DNA (426bp) protein (142aa)
Putative uncharacterized protein id=3847106 bin=GWC2_Methylomirabilis_70_16 species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
14_0903_02_30cm_scaffold_468_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(9887..10174)
DNA (288bp) protein (96aa)
id=3847105 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
14_0903_02_30cm_scaffold_468_13
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(10205..11722)
DNA (1518bp) protein (506aa)
Putative NtrC family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABD4_GEMAT
putative NtrC family two-component response regulator
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_0903_02_30cm_scaffold_468_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11715..12272)
DNA (558bp) protein (186aa)
Molybdenum cofactor biosynthesis protein Mog n=3 Tax=Dehalobacter RepID=K4L8Y8_9FIRM
mog; putative [Fe] hydrogenase (Fe-only hydrogenase) (ferredoxin bidirectional hydrogenase), subunit gamma (hymA-like)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0903_02_30cm_scaffold_468_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12269..12598)
DNA (330bp) protein (110aa)
aminomethyltransferase (EC:2.1.2.10)
Aminomethyltransferase n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9Y850_HALP7
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0903_02_30cm_scaffold_468_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12807..13346)
DNA (540bp) protein (180aa)
gcvT; aminomethyltransferase (EC:2.1.2.10)
Aminomethyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABD5_GEMAT
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0903_02_30cm_scaffold_468_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13343..14242)
DNA (900bp) protein (300aa)
argF; ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase, catabolic n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABD7_GEMAT
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0903_02_30cm_scaffold_468_18
unknown

Not on your lists

comp(14395..14793)
DNA (399bp) protein (133aa)

This feature has no annotations

14_0903_02_30cm_scaffold_468_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(14881..15321)
DNA (441bp) protein (147aa)
TonB-dependent receptor plug n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJI9_RHOM4
TonB-dependent outer membrane protein SusC/RagA, conserved site {ECO:0000313|EMBL:AHG93777.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
TonB-dependent receptor plug
14_0903_02_30cm_scaffold_468_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15318..16841)
DNA (1524bp) protein (508aa)
ATP-dependent protease ATPase subunit HslU n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SG16_RHOMR
ATP-dependent hsl protease ATP-binding subunit hslU
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0903_02_30cm_scaffold_468_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(16844..17389)
DNA (546bp) protein (182aa)
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hslV; ATP-dependent protease peptidase subunit (EC:3.4.25.1)
ATP-dependent protease subunit HslV n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=HSLV_GEMAT
14_0903_02_30cm_scaffold_468_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(17401..18294)
DNA (894bp) protein (298aa)
Tyrosine recombinase XerC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABE3_GEMAT
xerC; tyrosine recombinase XerC
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0903_02_30cm_scaffold_468_23
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(18291..19598)
DNA (1308bp) protein (436aa)
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABE4_GEMAT
gid; tRNA uridine 5-carboxymethylaminomethyl modification enzyme Gid
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_0903_02_30cm_scaffold_468_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(19637..22030)
DNA (2394bp) protein (798aa)
topA; DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABE5_GEMAT
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0903_02_30cm_scaffold_468_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(22089..22607)
DNA (519bp) protein (173aa)
aroK; shikimate kinase (EC:2.7.1.71)
Shikimate kinase id=4542810 bin=GWF2_Melainabacteria_37_15 species=Desulfurispirillum indicum genus=Desulfurispirillum taxon_order=Chrysiogenales taxon_class=Chrysiogenetes phylum=Chrysiogenetes tax=GWF2_Melainabacteria_37_15 organism_group=Melainabacteria
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0903_02_30cm_scaffold_468_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(22604..23788)
DNA (1185bp) protein (395aa)
aroC; chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABE8_GEMAT
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0903_02_30cm_scaffold_468_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(23878..26469)
DNA (2592bp) protein (864aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABE9_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0903_02_30cm_scaffold_468_28
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(26503..28419)
DNA (1917bp) protein (639aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABF0_GEMAT
Type II and III secretion system protein {ECO:0000313|EMBL:AHG91513.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
14_0903_02_30cm_scaffold_468_29
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(28416..28829)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABF1_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0903_02_30cm_scaffold_468_30
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(28816..29448)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABF2_GEMAT
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
Displaying items 1-30 of 49 in total

View Taxonomy