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14_0903_12_20cm_scaffold_676

Search features with annotation key words

Displaying items 1-30 of 43 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0903_12_20cm_scaffold_676_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(2..1768)
DNA (1767bp) protein (589aa)
ASPIC/UnbV domain protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJI6_RHOM4
ASPIC/UnbV domain protein {ECO:0000313|EMBL:AHG93775.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ASPIC/UnbV domain-containing protein
14_0903_12_20cm_scaffold_676_2
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1798..3405)
DNA (1608bp) protein (536aa)
RagB/SusD domain protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJI7_RHOM4 rbh
RagB/SusD domain-containing protein rbh
RagB/SusD domain protein {ECO:0000313|EMBL:ACY48645.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10); (Rhodothermus obamensis).;"
14_0903_12_20cm_scaffold_676_3
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3419..6604)
DNA (3186bp) protein (1062aa)
TonB-dependent receptor plug n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJI8_RHOM4
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:ACY48646.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10); (Rhodothermus obamensis).;"
14_0903_12_20cm_scaffold_676_4
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(6698..7234)
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000382830F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH40174.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
14_0903_12_20cm_scaffold_676_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(7231..9024)
DNA (1794bp) protein (598aa)
gluconate 2-dehydrogenase (acceptor) (EC:1.1.99.3)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003792F76
Choline dehydrogenase-like flavoprotein {ECO:0000313|EMBL:CDM64608.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
14_0903_12_20cm_scaffold_676_6
unknown

Not on your lists

10606..10785
DNA (180bp) protein (60aa)

This feature has no annotations

14_0903_12_20cm_scaffold_676_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10798..12132)
DNA (1335bp) protein (445aa)
Amino acid permease n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MF43_CORCM
steT; amino acid permease
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_0903_12_20cm_scaffold_676_trna_1
unknown

Not on your lists

12315..12398
DNA (84bp)
transferRNA Asp
14_0903_12_20cm_scaffold_676_8
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

12675..13130
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036231EA
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
14_0903_12_20cm_scaffold_676_9
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

13132..15270
DNA (2139bp) protein (713aa)
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DN80_SINAD id=5224646 bin=16ft_combo_ws3_JS1 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein
Tax=RBG_16_RIF_WS3X_71_46_curated
14_0903_12_20cm_scaffold_676_10
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

15372..17537
DNA (2166bp) protein (722aa)
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DN80_SINAD id=5224646 bin=16ft_combo_ws3_JS1 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein
Tax=RBG_16_RIF_WS3X_71_46_curated
14_0903_12_20cm_scaffold_676_11
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(17534..18199)
DNA (666bp) protein (222aa)
Ig domain protein, group 1 domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020K9_SOLUE
Ig domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
14_0903_12_20cm_scaffold_676_12
unknown

Not on your lists

comp(18333..19010)
DNA (678bp) protein (226aa)

This feature has no annotations

14_0903_12_20cm_scaffold_676_13
unknown

Not on your lists

comp(19113..19628)
DNA (516bp) protein (172aa)

This feature has no annotations

14_0903_12_20cm_scaffold_676_14
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(19805..20311)
DNA (507bp) protein (169aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01W74_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ86091.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
14_0903_12_20cm_scaffold_676_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(20364..20864)
DNA (501bp) protein (167aa)
glucose/sorbosone dehydrogenase n=1 Tax=Janthinobacterium lividum PAMC 25724 RepID=UPI000287FBF4 id=5225724 bin=16ft_combo_ws3_JS1 species=Janthinobacterium lividum genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
glucose/sorbosone dehydrogenase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0903_12_20cm_scaffold_676_16
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(20876..21742)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAG9_GEMAT
hypothetical protein
Tax=RBG_13_Acidobacteria_68_16_curated
14_0903_12_20cm_scaffold_676_17
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(21739..22344)
DNA (606bp) protein (202aa)
Tax=RBG_13_Acidobacteria_68_16_curated
14_0903_12_20cm_scaffold_676_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(22341..22871)
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00037F2CAB
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
RNA polymerase ECF-type sigma factor
14_0903_12_20cm_scaffold_676_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(22950..23588)
DNA (639bp) protein (213aa)
hypothetical protein id=24594421 bin=RBG_19FT_COMBO_GAL15_69_19 species=Herbaspirillum sp. JC206 genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0903_12_20cm_scaffold_676_20
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

23647..25236
DNA (1590bp) protein (530aa)
malate synthase (EC:2.3.3.9)
Malate synthase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q022L4_SOLUE
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_0903_12_20cm_scaffold_676_21
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25256..26566
DNA (1311bp) protein (437aa)
Isocitrate lyase {ECO:0000313|EMBL:EKP95339.1}; EC=4.1.3.1 {ECO:0000313|EMBL:EKP95339.1};; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
isocitrate lyase (EC:4.1.3.1)
Isocitrate lyase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q2R7_9FIRM
14_0903_12_20cm_scaffold_676_22
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

26633..26896
DNA (264bp) protein (88aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_0903_12_20cm_scaffold_676_23
unknown

Not on your lists

27002..27472
DNA (471bp) protein (157aa)

This feature has no annotations

14_0903_12_20cm_scaffold_676_24
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

27485..29092
DNA (1608bp) protein (536aa)
Twitching motility protein PilT n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P023_9DELT
pilT; twitching mobility protein rbh
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_0903_12_20cm_scaffold_676_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(29082..30113)
DNA (1032bp) protein (344aa)
aroF; phospho-2-dehydro-3-deoxyheptonate aldolase (Phospho-2-keto-3-deoxyheptonate aldolase) (DAHP synthetase) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase) (EC:2.5.1.54) id=14428638 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:AHG91977.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
phospho-2-dehydro-3-deoxyheptonate aldolase
14_0903_12_20cm_scaffold_676_trna_2
unknown

Not on your lists

comp(30472..30543)
DNA (72bp)
transferRNA Thr
14_0903_12_20cm_scaffold_676_26
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(30608..31501)
DNA (894bp) protein (298aa)
Transcriptional regulator, LysR family id=4351546 bin=GWF2_Methylomirabilis_70_14 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
LysR family transcriptional regulator
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_0903_12_20cm_scaffold_676_27
unknown

Not on your lists

31612..31866
DNA (255bp) protein (85aa)

This feature has no annotations

14_0903_12_20cm_scaffold_676_28
Gallaecimonas xiamenensis, Gallaecimonas, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31863..32084
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Gallaecimonas xiamenensis 3-C-1 RepID=K2IXI7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKE75141.1}; TaxID=745411 species="Bacteria; Proteobacteria; Gammaproteobacteria; Gallaecimonas.;" source="Gallaecimonas xiamenensis 3-C-1.;"
Displaying items 1-30 of 43 in total

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