ggKbase home page

14_0903_13_30cm_scaffold_6043943

Search features with annotation key words

Displaying 25 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0903_13_30cm_scaffold_6043943_1
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

3..1040
DNA (1038bp) protein (346aa)
hypothetical protein id=16783896 bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=Maribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
14_0903_13_30cm_scaffold_6043943_2
R_OD1_Yanofskybacteria_43_22, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

1368..2513
DNA (1146bp) protein (382aa)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_43_22_curated
14_0903_13_30cm_scaffold_6043943_3
unknown

Not on your lists

2723..2953
DNA (231bp) protein (77aa)

This feature has no annotations

14_0903_13_30cm_scaffold_6043943_4
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(2987..3211)
DNA (225bp) protein (75aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
14_0903_13_30cm_scaffold_6043943_5
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(3359..3856)
DNA (498bp) protein (166aa)
Plastoquinol--plastocyanin reductase (EC:1.10.9.1)
Putative Plastoquinol--plastocyanin reductase id=4384277 bin=GWF2_Ignavibacteria_35_20 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
14_0903_13_30cm_scaffold_6043943_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3893..5500)
DNA (1608bp) protein (536aa)
CoA-binding domain protein id=3061169 bin=GWA2_Elusimicrobia_69_24 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
CoA-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
14_0903_13_30cm_scaffold_6043943_7
unknown

Not on your lists

5657..5869
DNA (213bp) protein (71aa)

This feature has no annotations

14_0903_13_30cm_scaffold_6043943_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(5850..6353)
DNA (504bp) protein (168aa)
Universal stress protein family id=12556984 bin=CNBR_ACIDO species=Planctomyces maris genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
universal stress protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
14_0903_13_30cm_scaffold_6043943_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(6357..6953)
DNA (597bp) protein (199aa)
Universal stress protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C8P0_9PLAN
usp; universal stress protein Usp
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
14_0903_13_30cm_scaffold_6043943_10
BJP_IG2102_BRC1_58_13, BRC1, Bacteria

Not on your lists

comp(7073..7414)
DNA (342bp) protein (114aa)
dihydroorotate oxidase; K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] id=14631114 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
dihydroorotate dehydrogenase (EC:1.3.98.1)
Tax=BJP_IG2102_BRC1_58_13
14_0903_13_30cm_scaffold_6043943_11
unknown

Not on your lists

7670..7804
DNA (135bp) protein (45aa)

This feature has no annotations

14_0903_13_30cm_scaffold_6043943_12
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7901..8488
DNA (588bp) protein (196aa)
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000256|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; Pyridoxal 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01629}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
Pyridoxine/pyridoxamine 5'-phosphate oxidase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MQK7_CORCM
pdxH; pyridoxamine 5-phosphate oxidase
14_0903_13_30cm_scaffold_6043943_13
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(8651..9037)
DNA (387bp) protein (129aa)
Ribonuclease VapC n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7A6Q9_THEAQ
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
14_0903_13_30cm_scaffold_6043943_14
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(9034..9303)
DNA (270bp) protein (90aa)
Protein transcription factor n=1 Tax=Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) RepID=D3PLA4_MEIRD
protein transcription factor
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
14_0903_13_30cm_scaffold_6043943_15
RIFOXYD12_FULL_Elusimicrobia_66_9_curated, Elusimicrobia, Bacteria

Not on your lists

comp(9378..10664)
DNA (1287bp) protein (429aa)
Xanthine/uracil/vitamin C permease id=2322855 bin=GWA2_Elusimicrobia_66_18 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
xanthine/uracil/vitamin C permease
Tax=RIFOXYD12_FULL_Elusimicrobia_66_9_curated
14_0903_13_30cm_scaffold_6043943_16
unknown

Not on your lists

10799..11038
DNA (240bp) protein (80aa)

This feature has no annotations

14_0903_13_30cm_scaffold_6043943_17
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

11409..13574
DNA (2166bp) protein (722aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5)
NADH dehydrogenase (Quinone) id=4074710 bin=GWA2_Ignavibacteria_55_11 species=Opitutus terrae genus=Opitutus taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
14_0903_13_30cm_scaffold_6043943_18
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

13593..14549
DNA (957bp) protein (319aa)
Putative Formate hydrogenlyase, membrane subunit n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P8U5_9BACT
putative formate hydrogenlyase, membrane subunit
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
14_0903_13_30cm_scaffold_6043943_19
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

14620..15270
DNA (651bp) protein (217aa)
Hydrogenase 4 membrane component (E) n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZSF0_OPITP
hydrogenase 4 membrane component (E)
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
14_0903_13_30cm_scaffold_6043943_20
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

15279..16766
DNA (1488bp) protein (496aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5)
NADH dehydrogenase (Quinone) n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZSF1_OPITP
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
14_0903_13_30cm_scaffold_6043943_21
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

16763..18346
DNA (1584bp) protein (528aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5)
NADH dehydrogenase (Quinone) n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZSF2_OPITP
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
14_0903_13_30cm_scaffold_6043943_22
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

18430..19281
DNA (852bp) protein (284aa)
NADH ubiquinone oxidoreductase 20 kDa subunit id=3114604 bin=GWA2_Ignavibacteria_55_11 species=Opitutus terrae genus=Opitutus taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
NADH ubiquinone oxidoreductase 20 kDa subunit
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
14_0903_13_30cm_scaffold_6043943_23
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19664..20137
DNA (474bp) protein (158aa)
OsmC family protein n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LQV8_ACIC1
OsmC family protein
OsmC family protein {ECO:0000313|EMBL:ABK51818.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
14_0903_13_30cm_scaffold_6043943_24
unknown

Not on your lists

20609..20713
DNA (105bp) protein (35aa)

This feature has no annotations

14_0903_13_30cm_scaffold_6043943_25
RBG_13_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

20710..21150
DNA (441bp) protein (147aa)
response regulator receiver
Response regulator receiver protein id=3495316 bin=GWF2_Bacteroidetes_41_31 species=Nostoc punctiforme genus=Nostoc taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
Tax=RBG_13_Chloroflexi_57_8_curated
Displaying 25 items

View Taxonomy