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14_0903_16_40cm_scaffold_1373

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Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0903_16_40cm_scaffold_1373_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(3..482)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QJW2_9CYAN
Ketosteroid isomerase-like enzyme {ECO:0000313|EMBL:CDM65737.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
14_0903_16_40cm_scaffold_1373_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

513..2894
DNA (2382bp) protein (794aa)
Type II and III secretion system protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D845_9BACT
Type II and III secretion system protein {ECO:0000313|EMBL:EDY17399.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
gspD; general secretion pathway protein D
14_0903_16_40cm_scaffold_1373_3
unknown

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2908..3315
DNA (408bp) protein (136aa)

This feature has no annotations

14_0903_16_40cm_scaffold_1373_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

3474..5213
DNA (1740bp) protein (580aa)
Type II secretion system protein E n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D852_9BACT
Type II secretion system protein E {ECO:0000313|EMBL:EDY17406.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
type II secretion system protein E (GspE)
14_0903_16_40cm_scaffold_1373_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(5265..5912)
DNA (648bp) protein (216aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Ribulose-phosphate 3-epimerase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZD9_9BACT
rpeA; ribulose-phosphate 3-epimerase
14_0903_16_40cm_scaffold_1373_6
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

6150..7187
DNA (1038bp) protein (346aa)
rod shape-determining protein Mbl n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746B3C
mreB; rod shape-determining protein MreB
Tax=GWF2_Lentisphaerae_57_35_curated
14_0903_16_40cm_scaffold_1373_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

7293..8096
DNA (804bp) protein (268aa)
Cell shape-determining protein MreC n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D4U1_9BACT
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
rod shape-determining protein MreC
14_0903_16_40cm_scaffold_1373_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

8093..8635
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D4U2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY18545.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
14_0903_16_40cm_scaffold_1373_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

8632..10908
DNA (2277bp) protein (759aa)
Beta-lactamase {ECO:0000256|RuleBase:RU361140}; EC=3.5.2.6 {ECO:0000256|RuleBase:RU361140};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Penicillin-binding protein 2 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D4U3_9BACT
ftsI; Cell division protein FtsI
14_0903_16_40cm_scaffold_1373_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

10981..12555
DNA (1575bp) protein (525aa)
Ribonuclease, Rne/Rng family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D4U4_9BACT
Ribonuclease, Rne/Rng family {ECO:0000313|EMBL:EDY18547.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
ribonuclease, Rne/Rng family
14_0903_16_40cm_scaffold_1373_11
unknown

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12714..13397
DNA (684bp) protein (228aa)

This feature has no annotations

14_0903_16_40cm_scaffold_1373_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

13454..14629
DNA (1176bp) protein (392aa)
Thiazole biosynthesis protein ThiH n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWW4_9BACT
Thiazole biosynthesis protein ThiH {ECO:0000313|EMBL:EDY21284.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
thiH; thiamine biosynthesis enzyme ThiH
14_0903_16_40cm_scaffold_1373_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

14626..14826
DNA (201bp) protein (67aa)
Thiamine biosynthesis protein ThiS n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWW3_9BACT
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:EDY21283.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
14_0903_16_40cm_scaffold_1373_14
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(14851..16251)
DNA (1401bp) protein (467aa)
Membrane-bound serine protease, NfeD family id=3793111 bin=GWF2_Lentisphaerae_57_35 species=Methylacidiphilum fumariolicum genus=Methylacidiphilum taxon_order=Methylacidiphilales taxon_class=unknown phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
nfeD; membrane-bound serine protease, NfeD family
Tax=GWF2_Lentisphaerae_57_35_curated
14_0903_16_40cm_scaffold_1373_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

16329..18155
DNA (1827bp) protein (609aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
DNA primase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWV5_9BACT
DNA primase rbh
14_0903_16_40cm_scaffold_1373_16
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

18430..20067
DNA (1638bp) protein (546aa)
RNA polymerase sigma factor SigA n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWV6_9BACT
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
RpoD family RNA polymerase sigma-70 subunit
14_0903_16_40cm_scaffold_1373_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

20476..20838
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D737_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY17688.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
14_0903_16_40cm_scaffold_1373_18
unknown

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comp(20942..21190)
DNA (249bp) protein (83aa)

This feature has no annotations

14_0903_16_40cm_scaffold_1373_19
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(21242..22342)
DNA (1101bp) protein (367aa)
ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase (EC:1.1.1.193 3.5.4.26)
Riboflavin biosynthesis protein RibD n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D449_9BACT
Riboflavin biosynthesis protein RibD {ECO:0000313|EMBL:EDY18650.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
14_0903_16_40cm_scaffold_1373_trna_2
unknown

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comp(22400..22473)
DNA (74bp)
transferRNA Arg
14_0903_16_40cm_scaffold_1373_trna_1
unknown

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comp(22556..22627)
DNA (72bp)
transferRNA His
14_0903_16_40cm_scaffold_1373_20
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

22825..24486
DNA (1662bp) protein (554aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUH3_9BACT
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:EDY22211.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
nrfG; TPR repeats containing protein
14_0903_16_40cm_scaffold_1373_21
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24852..25568
DNA (717bp) protein (239aa)
Putative uncharacterized protein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D932_MYXXD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF90260.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;"
14_0903_16_40cm_scaffold_1373_22
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(25557..28121)
DNA (2565bp) protein (855aa)
Aconitate hydratase 1 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWZ4_9BACT
Aconitate hydratase 1 {ECO:0000313|EMBL:EDY21314.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
aconitate hydratase 1
14_0903_16_40cm_scaffold_1373_23
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(28118..28282)
DNA (165bp) protein (55aa)
Aconitate hydratase 1 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWZ4_9BACT
Aconitate hydratase 1 {ECO:0000313|EMBL:EDY21314.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
aconitate hydratase 1
14_0903_16_40cm_scaffold_1373_24
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(28392..28886)
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-M04 RepID=UPI000375D987
alkyl hydroperoxide reductase
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
14_0903_16_40cm_scaffold_1373_25
unknown

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29052..29126
DNA (75bp) protein (25aa)

This feature has no annotations

Displaying 27 items

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