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14_0919_02_20cm_scaffold_608

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0919_02_20cm_scaffold_608_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2..256)
DNA (255bp) protein (85aa)
YraH id=2316596 bin=GWA2_Ignavibacteria_55_11 species=Bacillus sp. NRRL B-14911 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
Glyoxalase-like domain protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0919_02_20cm_scaffold_608_2
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(837..1934)
DNA (1098bp) protein (366aa)
peptidylarginine deiminase-like protein (EC:3.5.3.12)
Agmatine deiminase id=3982000 bin=GWC2_Syntrophobacterales_56_13 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good + rbh
Tax=RBG_16_Deltaproteobacteria_58_17_curated
14_0919_02_20cm_scaffold_608_3
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(1985..2896)
DNA (912bp) protein (304aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase id=2854538 bin=GWC2_Deltaproteobacteria_66_88 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria rbh
hydrolase
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
14_0919_02_20cm_scaffold_608_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

2996..4033
DNA (1038bp) protein (346aa)
YVTN beta-propeller repeat-containing protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XD71_9BACT
YVTN beta-propeller repeat-containing protein {ECO:0000313|EMBL:EEF62017.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
14_0919_02_20cm_scaffold_608_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(4040..4723)
DNA (684bp) protein (228aa)
OmpR family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8B6_GEMAT
response regulator receiver
Response regulator receiver {ECO:0000313|EMBL:AHG87878.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_0919_02_20cm_scaffold_608_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4720..6402)
DNA (1683bp) protein (561aa)
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8B7_GEMAT
ATP-binding region ATPase domain protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0919_02_20cm_scaffold_608_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

6621..7169
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI000369F440
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_0919_02_20cm_scaffold_608_8
unknown

Not on your lists

7166..7720
DNA (555bp) protein (185aa)

This feature has no annotations

14_0919_02_20cm_scaffold_608_9
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(7747..9192)
DNA (1446bp) protein (482aa)
mmsA; methylmalonate-semialdehyde dehydrogenase (EC:1.2.1.27)
methylmalonate-semialdehyde dehydrogenase id=24563983 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin rbh
Tax=RBG_16_Acidobacteria_68_9_curated
14_0919_02_20cm_scaffold_608_10
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(9235..10647)
DNA (1413bp) protein (471aa)
extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein id=24429358 bin=RBG_19FT_COMBO_GAL15_69_19 species=Amycolatopsis sp. ATCC 39116 genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
sugar ABC transporter periplasmic ligand binding protein
Tax=RBG_16_Armatimonadetes_67_12_curated
14_0919_02_20cm_scaffold_608_11
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10705..12150)
DNA (1446bp) protein (482aa)
Short chain fatty acid transporter n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPG7_KORVE rbh
Short chain fatty acids transporter {ECO:0000313|EMBL:KJR45008.1}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
short chain fatty acid transporter rbh
14_0919_02_20cm_scaffold_608_12
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(12164..14095)
DNA (1932bp) protein (644aa)
AMP-dependent synthetase and ligase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7F2_SPHTD rbh
AMP-dependent synthetase and ligase rbh
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ACZ39798.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
14_0919_02_20cm_scaffold_608_13
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14152..15396)
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBU7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:GAN45139.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
14_0919_02_20cm_scaffold_608_14
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(15432..16268)
DNA (837bp) protein (279aa)
binding-protein-dependent transport system inner membrane protein; K02026 multiple sugar transport system permease protein id=24429354 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
ycjP; ABC transporter permease
Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
14_0919_02_20cm_scaffold_608_15
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(16265..17173)
DNA (909bp) protein (303aa)
ABC transporter permease; K02025 multiple sugar transport system permease protein id=24429355 bin=RBG_19FT_COMBO_GAL15_69_19 species=Herbaspirillum sp. JC206 genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
binding-protein-dependent transport system inner membrane protein
Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
14_0919_02_20cm_scaffold_608_16
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(17170..18216)
DNA (1047bp) protein (349aa)
sugar ABC transporter ATP binding protein; putative glycerol 3-phosphate transport protein, ugpC-like protein (EC:3.6.3.-) id=14631356 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC
Tax=CSP1_3_Armatimonadetes
14_0919_02_20cm_scaffold_608_17
unknown

Not on your lists

comp(18228..18458)
DNA (231bp) protein (77aa)

This feature has no annotations

14_0919_02_20cm_scaffold_608_18
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(18469..18816)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAF0_SPHTD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ40793.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
14_0919_02_20cm_scaffold_608_19
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(18813..19748)
DNA (936bp) protein (312aa)
Formate dehydrogenase accessory protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAE9_SPHTD
formate dehydrogenase accessory protein
Formate dehydrogenase accessory protein {ECO:0000313|EMBL:ACZ40792.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
14_0919_02_20cm_scaffold_608_20
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(19938..20852)
DNA (915bp) protein (305aa)
Polysulphide reductase NrfD n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAE7_SPHTD
Polysulfide reductase NrfD
Polysulphide reductase NrfD {ECO:0000313|EMBL:ACZ40790.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
14_0919_02_20cm_scaffold_608_21
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(20845..21660)
DNA (816bp) protein (272aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CF23_THET1
4Fe-4S ferredoxin
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:ACZ41529.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
14_0919_02_20cm_scaffold_608_22
unknown

Not on your lists

comp(21657..21761)
DNA (105bp) protein (35aa)

This feature has no annotations

Displaying 22 items

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