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14_0927_09_40cm_scaffold_2

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Displaying items 1-30 of 391 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0927_09_40cm_scaffold_2_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

1..288
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A645_GEMAT
S-adenosylmethionine-dependent methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0927_09_40cm_scaffold_2_2
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

Not on your lists

437..1132
DNA (696bp) protein (232aa)
Cation efflux family protein n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FGV9_STIAD
cation efflux family protein
Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
14_0927_09_40cm_scaffold_2_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

1126..1977
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A642_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0927_09_40cm_scaffold_2_4
unknown

Not on your lists

2121..2294
DNA (174bp) protein (58aa)

This feature has no annotations

14_0927_09_40cm_scaffold_2_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

2401..5367
DNA (2967bp) protein (989aa)
Formate dehydrogenase, alpha subunit n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PS75_KRIFD
formate dehydrogenase subunit alpha
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0927_09_40cm_scaffold_2_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

5406..6197
DNA (792bp) protein (264aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01PN9_SOLUE
short-chain dehydrogenase/reductase SDR
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0927_09_40cm_scaffold_2_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

6234..7262
DNA (1029bp) protein (343aa)
Threonine 3-dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A639_GEMAT rbh
Alcohol dehydrogenase GroES domain protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0927_09_40cm_scaffold_2_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

7259..8458
DNA (1200bp) protein (400aa)
kbl; putative 2-amino-3-ketobutyrate coenzyme A ligase (EC:2.3.1.29)
Putative 2-amino-3-ketobutyrate coenzyme A ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A638_GEMAT
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_0927_09_40cm_scaffold_2_9
unknown

Not on your lists

8607..9149
DNA (543bp) protein (181aa)

This feature has no annotations

14_0927_09_40cm_scaffold_2_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

9360..10625
DNA (1266bp) protein (422aa)
OmpA/MotB domain protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_0927_09_40cm_scaffold_2_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(10609..11721)
DNA (1113bp) protein (371aa)
Zn-dependent dipeptidase, microsomal dipeptidase {ECO:0000313|EMBL:CDM65778.1}; EC=3.4.13.19 {ECO:0000313|EMBL:CDM65778.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
membrane dipeptidase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B6F708
M19 family peptidase
14_0927_09_40cm_scaffold_2_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11706..12215)
DNA (510bp) protein (170aa)
Putative 3-methyladenine DNA glycosylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A637_GEMAT
3-methyladenine DNA glycosylase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0927_09_40cm_scaffold_2_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12287..13636)
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A636_GEMAT
NYN domain, limkain-b1-type
NYN domain, limkain-b1-type {ECO:0000313|EMBL:AHG90142.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_0927_09_40cm_scaffold_2_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13697..14107)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A636_GEMAT
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_0927_09_40cm_scaffold_2_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(14104..15702)
DNA (1599bp) protein (533aa)
Long-chain fatty-acid-CoA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A635_GEMAT rbh
AMP-dependent synthetase and ligase
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_0927_09_40cm_scaffold_2_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

15982..16356
DNA (375bp) protein (125aa)
Sigma-24, ECF subfamily protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TRK4_9PROT
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG88709.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_0927_09_40cm_scaffold_2_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

16353..17378
DNA (1026bp) protein (342aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88710.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_0927_09_40cm_scaffold_2_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17359..17778)
DNA (420bp) protein (140aa)
protein of unknown function UPF0047
hypothetical protein id=14426564 bin=bin1_lowGC species=Thermovibrio ammonificans genus=Thermovibrio taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=bin1_lowGC organism_group=Unknown_CP
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0927_09_40cm_scaffold_2_19
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

17951..19114
DNA (1164bp) protein (388aa)
Putative two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A634_GEMAT
putative two-component histidine kinase
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_0927_09_40cm_scaffold_2_20
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

19111..20490
DNA (1380bp) protein (460aa)
Putative NtrC family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A631_GEMAT
putative NtrC family two-component response regulator
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_0927_09_40cm_scaffold_2_21
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

20517..22262
DNA (1746bp) protein (582aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A630_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_0927_09_40cm_scaffold_2_22
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

22264..22896
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A629_GEMAT
Protein of unknown function DUF4390
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_0927_09_40cm_scaffold_2_23
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22893..23264)
DNA (372bp) protein (124aa)
hypothetical protein id=15192333 bin=GWC2_NOV_55_46 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_NOV_55_46 organism_group=Proteobacteria
hypothetical protein
Tax=GWC2_Deltaproteobacteria_55_46b_curated
14_0927_09_40cm_scaffold_2_24
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(23294..23842)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A628_GEMAT
HNH endonuclease
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_0927_09_40cm_scaffold_2_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(23929..25383)
DNA (1455bp) protein (485aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Argininosuccinate lyase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4N7_GEMAT
Argininosuccinate lyase
14_0927_09_40cm_scaffold_2_26
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(25383..26615)
DNA (1233bp) protein (411aa)
Argininosuccinate synthase n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=ASSY_CARHZ
Argininosuccinate synthase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0927_09_40cm_scaffold_2_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

26753..28423
DNA (1671bp) protein (557aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7A9_GEMAT
GMC oxidoreductase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0927_09_40cm_scaffold_2_28
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

28582..29169
DNA (588bp) protein (196aa)
Tat pathway signal sequence domain-containing protein
Tat pathway signal sequence domain-containing protein id=24658475 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0927_09_40cm_scaffold_2_29
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

29176..30465
DNA (1290bp) protein (430aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7B3_GEMAT
oxidoreductase domain protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0927_09_40cm_scaffold_2_30
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

30522..30755
DNA (234bp) protein (78aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Displaying items 1-30 of 391 in total

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