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14_0927_09_40cm_scaffold_2592

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0927_09_40cm_scaffold_2592_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

1..1965
DNA (1965bp) protein (655aa)
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DN80_SINAD id=5224646 bin=16ft_combo_ws3_JS1 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein
Tax=RBG_16_RIF_WS3X_71_46_curated
14_0927_09_40cm_scaffold_2592_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2039..2860)
DNA (822bp) protein (274aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7QUA0_METSZ
short-chain dehydrogenase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0927_09_40cm_scaffold_2592_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(2886..4067)
DNA (1182bp) protein (394aa)
glucose/sorbosone dehydrogenase n=1 Tax=Janthinobacterium lividum PAMC 25724 RepID=UPI000287FBF4 id=5225724 bin=16ft_combo_ws3_JS1 species=Janthinobacterium lividum genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
glucose/sorbosone dehydrogenase
Tax=RBG_16_RIF_WS3X_71_46_curated
14_0927_09_40cm_scaffold_2592_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4116..4610)
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000302BA73
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0927_09_40cm_scaffold_2592_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

4698..6287
DNA (1590bp) protein (530aa)
malate synthase (EC:2.3.3.9)
Malate synthase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q022L4_SOLUE
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_0927_09_40cm_scaffold_2592_6
Caldalkalibacillus thermarum, Caldalkalibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6305..7609
DNA (1305bp) protein (435aa)
isocitrate lyase n=1 Tax=Alicyclobacillus pohliae RepID=UPI000365CC3E
Isocitrate lyase {ECO:0000313|EMBL:EGL82361.1}; TaxID=986075 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Caldalkalibacillus.;" source="Caldalkalibacillus thermarum TA2.A1.;"
isocitrate lyase
14_0927_09_40cm_scaffold_2592_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

7719..7988
DNA (270bp) protein (90aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_0927_09_40cm_scaffold_2592_8
unknown

Not on your lists

7994..8464
DNA (471bp) protein (157aa)

This feature has no annotations

14_0927_09_40cm_scaffold_2592_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

8468..10066
DNA (1599bp) protein (533aa)
Twitching mobility protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACE3_GEMAT rbh
twitching motility protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_0927_09_40cm_scaffold_2592_10
R_PER_ii_51_35, PER-ii, Bacteria

Not on your lists

comp(10063..10497)
DNA (435bp) protein (145aa)
Tax=RIFCSPHIGHO2_01_FULL_PER_ii_51_35_curated
14_0927_09_40cm_scaffold_2592_11
R_PER_ii_51_35, PER-ii, Bacteria

Not on your lists

comp(10576..11433)
DNA (858bp) protein (286aa)
FAD dependent oxidoreductase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZMK6_OPITP
FAD dependent oxidoreductase
Tax=RIFCSPHIGHO2_01_FULL_PER_ii_51_35_curated
14_0927_09_40cm_scaffold_2592_12
unknown

Not on your lists

comp(11435..11626)
DNA (192bp) protein (64aa)

This feature has no annotations

14_0927_09_40cm_scaffold_2592_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11785..12438)
DNA (654bp) protein (218aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSJ0_9BACT
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_0927_09_40cm_scaffold_2592_14
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(12438..13157)
DNA (720bp) protein (240aa)
putative sensor histidine kinase (EC:2.7.13.3)
Multi-sensor signal transduction histidine kinase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSI9_9BACT
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:EEF57189.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
14_0927_09_40cm_scaffold_2592_15
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

13475..15310
DNA (1836bp) protein (612aa)
Chloride channel core n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGZ2_9BACT
Chloride channel core {ECO:0000313|EMBL:EEF60913.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
chloride channel core
14_0927_09_40cm_scaffold_2592_16
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15376..16464
DNA (1089bp) protein (363aa)
Patatin n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RNI2_ACCPU
Uncharacterized protein {ECO:0000313|EMBL:ETX02445.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
Patatin
14_0927_09_40cm_scaffold_2592_17
unknown

Not on your lists

comp(16678..16893)
DNA (216bp) protein (72aa)

This feature has no annotations

Displaying 17 items

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