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14_0927_09_40cm_scaffold_5541

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0927_09_40cm_scaffold_5541_1
unknown

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3..332
DNA (330bp) protein (110aa)

This feature has no annotations

14_0927_09_40cm_scaffold_5541_2

Not on your lists

401..2017
DNA (1617bp) protein (539aa)
ggtB; gamma-glutamyltransferase GgtB (EC:2.3.2.2)
gamma-glutamyltransferase n=1 Tax=Kangiella aquimarina RepID=UPI000365CCF5
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49419.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
14_0927_09_40cm_scaffold_5541_3
unknown

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2145..2786
DNA (642bp) protein (214aa)

This feature has no annotations

14_0927_09_40cm_scaffold_5541_4

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2808..3335
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6H8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AIA12737.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
14_0927_09_40cm_scaffold_5541_5

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3384..4028
DNA (645bp) protein (215aa)
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49414.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Putative uncharacterized protein id=4964036 bin=GWA2__Bacteriovorax-rel_49_15 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
hypothetical protein
14_0927_09_40cm_scaffold_5541_6
GWC2_Geobacteraceae_48_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4110..4583)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002ED2C2A
hypothetical protein
Tax=GWC2_Geobacteraceae_48_7_curated
14_0927_09_40cm_scaffold_5541_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(4660..5061)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7S4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY17447.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
type IV pilus biogenesis protein
14_0927_09_40cm_scaffold_5541_8
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

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5094..5594
DNA (501bp) protein (167aa)
Transcriptional regulators n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EWE4_9BACT
Transcriptional regulators
Transcriptional regulators {ECO:0000313|EMBL:CCW36116.1}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
14_0927_09_40cm_scaffold_5541_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(5591..6154)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037922C9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG92491.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_0927_09_40cm_scaffold_5541_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

6208..6615
DNA (408bp) protein (136aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XT23_9BACT
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EEF57013.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
putative glyoxalase
14_0927_09_40cm_scaffold_5541_11
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6646..7425
DNA (780bp) protein (260aa)
Glycosyl transferase, group 2 family protein n=1 Tax=Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535 RepID=D4T7I6_9XANT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
14_0927_09_40cm_scaffold_5541_12
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

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7422..7865
DNA (444bp) protein (148aa)
GCN5-related N-acetyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CU62_9BACT
acetyltransferase (GNAT) family protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
14_0927_09_40cm_scaffold_5541_13
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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7869..8210
DNA (342bp) protein (114aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NPV6_ROSCS
cupin
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:ABU59602.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
14_0927_09_40cm_scaffold_5541_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

8273..8533
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003627AB9
Transglycosylase-associated protein {ECO:0000313|EMBL:EDY18826.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
14_0927_09_40cm_scaffold_5541_15
Rivularia sp. PCC 7116, Rivularia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

8509..8955
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Rivularia sp. PCC 7116 RepID=K9RNT1_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY58752.1}; TaxID=373994 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Rivularia.;" source="Rivularia sp. PCC 7116.;"
14_0927_09_40cm_scaffold_5541_16
unknown

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9010..9162
DNA (153bp) protein (51aa)

This feature has no annotations

14_0927_09_40cm_scaffold_5541_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

9356..11503
DNA (2148bp) protein (716aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3R8_9BACT
14_0927_09_40cm_scaffold_5541_18
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

11587..12567
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XNV3_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEF58526.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
membrane protein
14_0927_09_40cm_scaffold_5541_19
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

12564..13790
DNA (1227bp) protein (409aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DCS0_9BACT
ntrB; Signal transduction histidine kinase with PAS domain
14_0927_09_40cm_scaffold_5541_20
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

13791..15956
DNA (2166bp) protein (722aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01V96_SOLUE rbh
hypothetical protein rbh
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ABJ86419.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
14_0927_09_40cm_scaffold_5541_21
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

16123..17550
DNA (1428bp) protein (476aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2Z9_9BACT
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:EDY19110.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
atoC; DNA-binding response regulator, NtrC family (contains REC, AAA-type ATPase, and DNA-binding Fis domains)
14_0927_09_40cm_scaffold_5541_22
unknown

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comp(17559..17777)
DNA (219bp) protein (73aa)

This feature has no annotations

Displaying 22 items

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