ggKbase home page

14_0927_09_40cm_scaffold_2847

Search features with annotation key words

Displaying 24 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0927_09_40cm_scaffold_2847_1
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

Not on your lists

3..308
DNA (306bp) protein (102aa)
Roadblock/LC7 family protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MSC9_9BACT
roadblock/LC7 family protein
Tax=BJP_IG2158_Zixibacteria_48_33
14_0927_09_40cm_scaffold_2847_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(556..1011)
DNA (456bp) protein (152aa)
Type II secretion system protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3S4_9BACT
Type II secretion system protein {ECO:0000313|EMBL:EDY18904.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
type II secretion system F domain-containing protein
14_0927_09_40cm_scaffold_2847_3
unknown

Not on your lists

1055..1564
DNA (510bp) protein (170aa)

This feature has no annotations

14_0927_09_40cm_scaffold_2847_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

1736..2350
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3D8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY19249.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
14_0927_09_40cm_scaffold_2847_5
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

2357..3238
DNA (882bp) protein (294aa)
4-hydroxybenzoate polyprenyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYX5_9BACT
ubiA; prenyltransferase
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
14_0927_09_40cm_scaffold_2847_6
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3300..3731)
DNA (432bp) protein (144aa)
Sugar-phosphate isomerase, RpiB/LacA/LacB family {ECO:0000313|EMBL:CCH54341.1}; EC=5.3.1.6 {ECO:0000313|EMBL:CCH54341.1};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
RpiB/LacA/LacB family sugar-phosphate isomerase (EC:5.3.1.6)
Sugar-phosphate isomerase, RpiB/LacA/LacB family n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GKB6_9BACT
14_0927_09_40cm_scaffold_2847_7
unknown

Not on your lists

4143..4628
DNA (486bp) protein (162aa)

This feature has no annotations

14_0927_09_40cm_scaffold_2847_8
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4744..4956
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XNJ9_9BACT
hypothetical protein
Tax=RBG_16_Desulfobacca_58_9_curated
14_0927_09_40cm_scaffold_2847_9
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

4956..5588
DNA (633bp) protein (211aa)
Uracil-DNA glycosylase superfamily id=2883685 bin=GWF2_OP3_43_52 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
uracil-DNA glycosylase superfamily protein
Tax=GWF2_WOR_2_43_52_curated
14_0927_09_40cm_scaffold_2847_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

5615..7432
DNA (1818bp) protein (606aa)
Oligoendopeptidase F n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0D3_9BACT
Oligoendopeptidase F {ECO:0000313|EMBL:EDY19795.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
oligoendopeptidase F
14_0927_09_40cm_scaffold_2847_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

7529..7996
DNA (468bp) protein (156aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1A2_9BACT
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:EDY19794.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
14_0927_09_40cm_scaffold_2847_12
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

8078..9271
DNA (1194bp) protein (398aa)
beta-lactamase n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017466C6
beta-lactamase
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
14_0927_09_40cm_scaffold_2847_13

Not on your lists

comp(9248..9664)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D4E7_9BACT
Secondary thiamine-phosphate synthase enzyme {ECO:0000313|EMBL:AIA11093.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
14_0927_09_40cm_scaffold_2847_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

9740..10285
DNA (546bp) protein (182aa)
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:EDY16188.1}; EC=2.4.2.8 {ECO:0000313|EMBL:EDY16188.1};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Hypoxanthine phosphoribosyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBK1_9BACT
hypoxanthine phosphoribosyltransferase
14_0927_09_40cm_scaffold_2847_15
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

10292..10537
DNA (246bp) protein (82aa)
molybdopterin synthase subunit MoaD / molybdopterin synthase subunit MoaE n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746B55
molybdopterin converting factor, subunit 1
Tax=GWF2_Verrucomicrobia_62_7_curated
14_0927_09_40cm_scaffold_2847_16
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(10576..11061)
DNA (486bp) protein (162aa)
UPF0234 protein CfE428DRAFT_0350 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUI7_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
14_0927_09_40cm_scaffold_2847_17
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11076..11873)
DNA (798bp) protein (266aa)
Uncharacterized protein {ECO:0000313|EMBL:KJE47796.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas viridans.;"
14_0927_09_40cm_scaffold_2847_18
unknown

Not on your lists

comp(11894..12202)
DNA (309bp) protein (103aa)

This feature has no annotations

14_0927_09_40cm_scaffold_2847_19
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(12308..13876)
DNA (1569bp) protein (523aa)
Mg chelatase, subunit ChlI n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7Q2_9BACT
Mg chelatase, subunit ChlI {ECO:0000313|EMBL:EDY17542.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
chaperone
14_0927_09_40cm_scaffold_2847_20

Not on your lists

14139..15008
DNA (870bp) protein (290aa)
RNA polymerase sigma factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7Q1_9BACT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
rpoD; DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)
14_0927_09_40cm_scaffold_2847_21
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(15162..16565)
DNA (1404bp) protein (468aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Pyruvate kinase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XHI9_9BACT
pyruvate kinase
14_0927_09_40cm_scaffold_2847_22
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(16662..17288)
DNA (627bp) protein (209aa)
Outer membrane protein-like protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EGE0_RUNSL
hypothetical protein
Outer membrane protein-like protein {ECO:0000313|EMBL:AEI49043.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
14_0927_09_40cm_scaffold_2847_23
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(17345..18760)
DNA (1416bp) protein (472aa)
Tetratricopeptide domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3I8_9BACT
Tetratricopeptide domain protein {ECO:0000313|EMBL:EDY18818.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
14_0927_09_40cm_scaffold_2847_24
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(18799..21273)
DNA (2475bp) protein (825aa)
DNA mismatch repair protein MutS n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D9S2_9BACT
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00039014}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
DNA mismatch repair protein MutS
Displaying 24 items

View Taxonomy