ggKbase home page

14_0927_12_20cm_scaffold_8

Search features with annotation key words

Displaying items 1-30 of 159 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0927_12_20cm_scaffold_8_1
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

3..2462
DNA (2460bp) protein (820aa)
multidrug ABC transporter substrate-binding protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000363336C rbh
Uncharacterized protein {ECO:0000313|EMBL:ABJ84886.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
hypothetical protein rbh
14_0927_12_20cm_scaffold_8_2
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3148..3453
DNA (306bp) protein (102aa)
Putative uncharacterized protein id=2067871 bin=GWE2_Bacteroidetes_42_39 species=Psychroflexus gondwanensis genus=Psychroflexus taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
Tax=GWE2_Bacteroidetes_42_39_curated
14_0927_12_20cm_scaffold_8_3
unknown

Not on your lists

3483..3824
DNA (342bp) protein (114aa)

This feature has no annotations

14_0927_12_20cm_scaffold_8_4
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(4565..5470)
DNA (906bp) protein (302aa)
ABC-3 protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AU0_SOLUE
ABC-3 protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
14_0927_12_20cm_scaffold_8_5
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(5488..6432)
DNA (945bp) protein (315aa)
Periplasmic solute binding protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AU1_SOLUE
periplasmic solute binding protein
Tax=RBG_16_Acidobacteria_70_10_curated
14_0927_12_20cm_scaffold_8_6
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(6452..7909)
DNA (1458bp) protein (486aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AU2_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ81824.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
14_0927_12_20cm_scaffold_8_7
unknown

Not on your lists

comp(7959..8396)
DNA (438bp) protein (146aa)

This feature has no annotations

14_0927_12_20cm_scaffold_8_8
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

8425..9210
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037DE12E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ88727.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
14_0927_12_20cm_scaffold_8_9
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9921..10745
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037B4F49
Hydroxypyruvate isomerase {ECO:0000313|EMBL:KHA63588.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
hydroxypyruvate isomerase
14_0927_12_20cm_scaffold_8_10
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

10839..11159
DNA (321bp) protein (107aa)
Tax=CG_Nitrosp_02
14_0927_12_20cm_scaffold_8_11
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

12071..12898
DNA (828bp) protein (276aa)
stearoyl-CoA 9-desaturase (EC:1.14.19.1)
Stearoyl-CoA 9-desaturase {ECO:0000313|EMBL:ADV83190.1}; EC=1.14.19.1 {ECO:0000313|EMBL:ADV83190.1};; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4).;"
Delta-9 acyl-phospholipid desaturase n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035C0EBC
14_0927_12_20cm_scaffold_8_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

13062..13967
DNA (906bp) protein (302aa)
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIY1_KORVE
sensor signal transduction histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
14_0927_12_20cm_scaffold_8_13
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

13964..14704
DNA (741bp) protein (247aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01N64_SOLUE
two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABJ83392.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
14_0927_12_20cm_scaffold_8_14
unknown

Not on your lists

comp(14701..14856)
DNA (156bp) protein (52aa)

This feature has no annotations

14_0927_12_20cm_scaffold_8_15
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(14888..15925)
DNA (1038bp) protein (346aa)
XRE family transcriptional regulator id=14627828 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
XRE family transcriptional regulator
Tax=CSP1_6_Rokubacteria
14_0927_12_20cm_scaffold_8_16
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

16102..16419
DNA (318bp) protein (106aa)
hypothetical protein id=14627827 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
14_0927_12_20cm_scaffold_8_17
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16955..17218
DNA (264bp) protein (88aa)
membrane protein n=1 Tax=Herbaspirillum seropedicae RepID=UPI0002F17205
membrane protein
Membrane protein {ECO:0000313|EMBL:AIF49510.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
14_0927_12_20cm_scaffold_8_18
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17846..18523
DNA (678bp) protein (226aa)
Alpha/beta hydrolase superfamily enzyme, predicted hydrolase n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C4L7_DESTA
Bradyrhizobium elkanii strain UASWS1015 Contig162, whole genome shotgun sequence {ECO:0000313|EMBL:KIU51939.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
alpha/beta hydrolase superfamily enzyme, predicted hydrolase
14_0927_12_20cm_scaffold_8_19

Not on your lists

18535..19578
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00038120C1
Beta-lactamase-like {ECO:0000313|EMBL:CBH99382.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
beta-lactamase-like protein
14_0927_12_20cm_scaffold_8_20
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

19907..23233
DNA (3327bp) protein (1109aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B5279C rbh
TonB-dependent receptor, plug
TonB-dependent receptor, plug {ECO:0000313|EMBL:ABJ83160.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
14_0927_12_20cm_scaffold_8_21
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

23254..23736
DNA (483bp) protein (161aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UU6_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ86574.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
14_0927_12_20cm_scaffold_8_22
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(23757..24443)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DFN5_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27466.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
14_0927_12_20cm_scaffold_8_23
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(24648..25337)
DNA (690bp) protein (230aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025B1_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ83415.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
14_0927_12_20cm_scaffold_8_24
unknown

Not on your lists

comp(25468..25716)
DNA (249bp) protein (83aa)

This feature has no annotations

14_0927_12_20cm_scaffold_8_25
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(25719..26708)
DNA (990bp) protein (330aa)
Molybdopterin dehydrogenase, FAD-binding n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025B6_SOLUE
molybdopterin dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
14_0927_12_20cm_scaffold_8_26
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(26708..28849)
DNA (2142bp) protein (714aa)
Xanthine dehydrogenase, molybdenum binding subunit apoprotein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITN3_KORVE
xanthine dehydrogenase, molybdenum binding subunit apoprotein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
14_0927_12_20cm_scaffold_8_27
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(28849..29562)
DNA (714bp) protein (238aa)
(2Fe-2S)-binding domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025B8_SOLUE
2Fe-2S iron-sulfur cluster binding domain-containing protein
(2Fe-2S)-binding domain protein {ECO:0000313|EMBL:ABJ83408.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
14_0927_12_20cm_scaffold_8_28
unknown

Not on your lists

comp(29690..29797)
DNA (108bp) protein (36aa)

This feature has no annotations

14_0927_12_20cm_scaffold_8_29
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(29818..30255)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003667BFC
cupin
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:ADW70823.1}; Flags: Precursor;; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
14_0927_12_20cm_scaffold_8_30
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(30354..31598)
DNA (1245bp) protein (415aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037A2703 rbh
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ABJ87974.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
Displaying items 1-30 of 159 in total

View Taxonomy