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14_0927_12_20cm_scaffold_16440

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0927_12_20cm_scaffold_16440_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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3..635
DNA (633bp) protein (211aa)
ogg; 8-oxoguanine DNA glycosylase (EC:3.2.2.-)
8-oxoguanine DNA glycosylase domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D964_9BACT
8-oxoguanine DNA glycosylase domain protein {ECO:0000313|EMBL:EDY16967.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
14_0927_12_20cm_scaffold_16440_2
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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810..1868
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DC80_9BACT
cell surface glycoprotein
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
14_0927_12_20cm_scaffold_16440_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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1875..2483
DNA (609bp) protein (203aa)
MotA/TolQ/ExbB proton channel n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DC79_9BACT
MotA/TolQ/ExbB proton channel {ECO:0000313|EMBL:EDY15956.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
tolQ; MotA/TolQ/ExbB proton channel family protein
14_0927_12_20cm_scaffold_16440_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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2494..2895
DNA (402bp) protein (134aa)
Biopolymer transport protein ExbD/TolR n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DC78_9BACT
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:EDY15955.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
exbD; biopolymer transport protein ExbD/TolR
14_0927_12_20cm_scaffold_16440_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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2898..3497
DNA (600bp) protein (200aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Peptide deformylase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DC77_9BACT
peptide deformylase
14_0927_12_20cm_scaffold_16440_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(3704..4477)
DNA (774bp) protein (258aa)
nucleoside triphosphate pyrophosphohydrolase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745149
MazG family protein {ECO:0000313|EMBL:EDY16358.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
tetrapyrrole methylase/MazG family protein
14_0927_12_20cm_scaffold_16440_7

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comp(4595..5314)
DNA (720bp) protein (240aa)
Integral membrane protein-like protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAY5_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48376.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
14_0927_12_20cm_scaffold_16440_8

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5368..5829
DNA (462bp) protein (154aa)
Putative PTS IIA-like nitrogen-regulatory protein PtsN n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZTS5_OPITP
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48377.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN
14_0927_12_20cm_scaffold_16440_9
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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comp(5821..6837)
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI000376C9AB
glpG; membrane associated serine protease, Rhomboid family
Membrane associated serine protease, Rhomboid family {ECO:0000313|EMBL:ACD83412.1}; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum; (strain V4)).;"
14_0927_12_20cm_scaffold_16440_10
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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6857..7531
DNA (675bp) protein (225aa)
Phosphoenolpyruvate carboxykinase [GTP] n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIC7_9BACT
phosphoenolpyruvate carboxykinase
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
14_0927_12_20cm_scaffold_16440_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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7525..8598
DNA (1074bp) protein (358aa)
Phosphoenolpyruvate carboxykinase [GTP] {ECO:0000256|HAMAP-Rule:MF_00452, ECO:0000256|SAAS:SAAS00222031}; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00452};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00452};; EC=4.1.1.32 {ECO:0000256|HAMAP-Rule:MF_00452};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Phosphoenolpyruvate carboxykinase [GTP] n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIC7_9BACT
phosphoenolpyruvate carboxykinase
14_0927_12_20cm_scaffold_16440_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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8807..9352
DNA (546bp) protein (182aa)
Excinuclease ABC, A subunit n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D774_9BACT
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
UvrA family protein
Displaying 12 items

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