ggKbase home page

14_0927_12_40cm_scaffold_931

Search features with annotation key words

Displaying items 1-30 of 35 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0927_12_40cm_scaffold_931_1
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1186
DNA (1185bp) protein (395aa)
Geranylgeranyl reductase id=5800202 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
geranylgeranyl reductase family
Tax=RBG_16_Deltaproteobacteria_48_10_curated
14_0927_12_40cm_scaffold_931_2
R_NC10_66_22, NC10, Bacteria

Not on your lists

1358..2707
DNA (1350bp) protein (450aa)
nsd; UDP-glucose 6-dehydrogenase; K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] id=14428695 bin=bin3_NC10 species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=bin3_NC10 organism_group=NC10
UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
14_0927_12_40cm_scaffold_931_3
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(2732..3703)
DNA (972bp) protein (324aa)
NAD-dependent epimerase/dehydratase family protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I2V1_CALAS
NAD-dependent epimerase/dehydratase family protein
NAD-dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:BAL99588.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
14_0927_12_40cm_scaffold_931_4
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3796..4461
DNA (666bp) protein (222aa)
Uncharacterized protein id=3089745 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
14_0927_12_40cm_scaffold_931_5
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(4497..5267)
DNA (771bp) protein (257aa)
exopolysaccharide biosynthesis protein (EC:3.1.3.48)
Exopolysaccharide biosynthesis protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F266_ACIC5
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
14_0927_12_40cm_scaffold_931_6
R_Deltaproteobacteria_47_10, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5283..5666)
DNA (384bp) protein (128aa)
Predicted permease n=1 Tax=uncultured euryarchaeote Alv-FOS5 RepID=Q3SBB3_9EURY
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_47_10_curated
14_0927_12_40cm_scaffold_931_7
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5659..6063)
DNA (405bp) protein (135aa)
Putative uncharacterized protein id=2080367 bin=GWE2_Bacteroidetes_41_25 species=unknown genus=Krokinobacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_41_25 organism_group=Bacteroidetes organism_desc=Good
protein of unknown function DUF81
Tax=GWA2_Bacteroidetes_40_15_curated
14_0927_12_40cm_scaffold_931_8
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6358..7713
DNA (1356bp) protein (452aa)
Lipopolysaccharide biosynthesis protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CEQ7_MYXFH
lipopolysaccharide biosynthesis protein
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:AEI66128.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus (strain ATCC BAA-855 / HW-1).;"
14_0927_12_40cm_scaffold_931_9
unknown

Not on your lists

comp(7762..8637)
DNA (876bp) protein (292aa)

This feature has no annotations

14_0927_12_40cm_scaffold_931_10
unknown

Not on your lists

comp(8732..8905)
DNA (174bp) protein (58aa)

This feature has no annotations

14_0927_12_40cm_scaffold_931_11
unknown

Not on your lists

8908..9054
DNA (147bp) protein (49aa)

This feature has no annotations

14_0927_12_40cm_scaffold_931_12
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

9200..10192
DNA (993bp) protein (331aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Thermoanaerobacter ethanolicus CCSD1 RepID=C7IU51_THEET
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
14_0927_12_40cm_scaffold_931_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(10602..14081)
DNA (3480bp) protein (1160aa)
hypothetical protein n=1 Tax=Lewinella persica RepID=UPI000369D84C
WD40-like beta Propeller containing protein
WD40-like beta Propeller containing protein {ECO:0000313|EMBL:AHG93481.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_0927_12_40cm_scaffold_931_14
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(14283..17597)
DNA (3315bp) protein (1105aa)
Glycosyl hydrolase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SPP3_9BACT
Glycosyl hydrolase {ECO:0000313|EMBL:BAL58129.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
BNR repeat-containing glycosyl hydrolase
14_0927_12_40cm_scaffold_931_15
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

17806..20229
DNA (2424bp) protein (808aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037DB28A
organic solvent tolerance protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
14_0927_12_40cm_scaffold_931_16
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

20347..21702
DNA (1356bp) protein (452aa)
amidase; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] id=14627578 bin=bin7_NC10_sister species=Pseudonocardia dioxanivorans genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
amidase
Tax=CSP1_6_Rokubacteria
14_0927_12_40cm_scaffold_931_17
unknown

Not on your lists

21825..22040
DNA (216bp) protein (72aa)

This feature has no annotations

14_0927_12_40cm_scaffold_931_18
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

Not on your lists

22086..22748
DNA (663bp) protein (221aa)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Brevibacillus sp. phR RepID=UPI0002E80280
3-demethylubiquinone-9 3-methyltransferase
Tax=RBG_16_Chloroflexi_52_11_curated
14_0927_12_40cm_scaffold_931_19
RBG_13_RIF03_48_7_curated, RIF3, Bacteria

Not on your lists

comp(22812..23843)
DNA (1032bp) protein (344aa)
phosphoesterase PA-phosphatase-like protein id=1249613 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
phosphoesterase PA-phosphatase-like protein
Tax=RBG_13_RIF03_48_7_curated
14_0927_12_40cm_scaffold_931_20
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23882..24805)
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Fervidibacteria bacterium JGI 0000001-G10 RepID=UPI00035CAB4C
HAD family hydrolase
HAD-superfamily subfamily IB, PSPase-like protein {ECO:0000313|EMBL:ABG05056.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
14_0927_12_40cm_scaffold_931_21
R_Planctomycetes_50_16, Planctomycetes, Bacteria

Not on your lists

comp(24838..25512)
DNA (675bp) protein (225aa)
CDP-alcohol phosphatidyltransferase n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B5E9B0
CDP-alcohol phosphatidyltransferase
Tax=RIFCSPLOWO2_02_FULL_Planctomycetes_50_16_curated
14_0927_12_40cm_scaffold_931_22
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

25977..26843
DNA (867bp) protein (289aa)
Cytochrome c-type biogenesis protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UT81_9AQUI
ccdA; cytochrome c biogenesis protein
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
14_0927_12_40cm_scaffold_931_23
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

26877..27446
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035D4353
alkyl hydroperoxide reductase
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:ABF39186.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
14_0927_12_40cm_scaffold_931_24
unknown

Not on your lists

comp(27629..28144)
DNA (516bp) protein (172aa)

This feature has no annotations

14_0927_12_40cm_scaffold_931_25
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(28264..29043)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V3H2_TERSS
Putative MetA-pathway of phenol degradation {ECO:0000313|EMBL:CDM64847.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
14_0927_12_40cm_scaffold_931_26
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(29116..30144)
DNA (1029bp) protein (343aa)
Tyrosine recombinase XerC n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZEF5_TERRK
site-specific recombinase XerD
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
14_0927_12_40cm_scaffold_931_27
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(30245..32965)
DNA (2721bp) protein (907aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
DNA topoisomerase 1 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILA9_KORVE
DNA topoisomerase
14_0927_12_40cm_scaffold_931_28
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(33153..34280)
DNA (1128bp) protein (376aa)
DNA protecting protein DprA n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILA8_KORVE
DNA processing protein DprA
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
14_0927_12_40cm_scaffold_931_29
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(34390..36873)
DNA (2484bp) protein (828aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QY1_SOLUE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
14_0927_12_40cm_scaffold_931_30
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

Not on your lists

comp(37014..40085)
DNA (3072bp) protein (1024aa)
aminotransferase class-III
putative class-III aminotransferase id=24392623 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate rbh
Tax=RBG_16_Aminicenantes_63_16_curated
Displaying items 1-30 of 35 in total

View Taxonomy