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14_0929_02_30cm_scaffold_35

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Displaying items 1-30 of 128 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0929_02_30cm_scaffold_35_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(3..719)
DNA (717bp) protein (239aa)
ABC transporter ATP-binding protein id=14625566 bin=bin7_NC10_sister species=Bordetella parapertussis genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC transporter ATP-binding protein, putative branched-chain amino acid transport
Tax=CSP1_6_Rokubacteria
14_0929_02_30cm_scaffold_35_2
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(719..1498)
DNA (780bp) protein (260aa)
livG3; branched-chain amino acid ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein id=14625567 bin=bin7_NC10_sister species=Haloferax denitrificans genus=Haloferax taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
livG3; branched-chain amino acid ABC transporter ATP-binding protein
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
14_0929_02_30cm_scaffold_35_3
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(1742..2740)
DNA (999bp) protein (333aa)
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein id=14625568 bin=bin7_NC10_sister species=Starkeya novella genus=Starkeya taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC transporter permease protein, putative branched-chain amino acid transport
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
14_0929_02_30cm_scaffold_35_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2737..3639)
DNA (903bp) protein (301aa)
livH-3; branched-chain amino acid ABC transporter permease id=14625569 bin=bin7_NC10_sister species=Natrinema versiforme genus=Natrinema taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
braD; inner-membrane translocator
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
14_0929_02_30cm_scaffold_35_5
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(3639..5870)
DNA (2232bp) protein (744aa)
Putative uncharacterized protein id=14625570 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacillariophyta tax=bin7_NC10_sister organism_group=NC10
Tax=CSP1_6_Rokubacteria
14_0929_02_30cm_scaffold_35_6
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(5932..7362)
DNA (1431bp) protein (477aa)
livK; branched-chain/neutral amino acids amide ABC transporter periplasmic substrate-binding protein id=14625571 bin=bin7_NC10_sister species=Haloferax denitrificans genus=Haloferax taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
branched chain amino acid ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
14_0929_02_30cm_scaffold_35_7
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

7467..8210
DNA (744bp) protein (248aa)
id=14625572 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=CSP1_6_Rokubacteria
14_0929_02_30cm_scaffold_35_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(8207..8731)
DNA (525bp) protein (175aa)
Intracellular protease, PfpI family id=4900374 bin=GWA2_Methylomirabilis_73_35 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Pfpi family intracellular protease
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_02_30cm_scaffold_35_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(8743..8907)
DNA (165bp) protein (55aa)
Putative regulatory protein, FmdB family id=4900375 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
FmdB family regulatory protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_02_30cm_scaffold_35_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(8962..10353)
DNA (1392bp) protein (464aa)
amidase id=14430439 bin=bin3_NC10 species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
amidase
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_02_30cm_scaffold_35_11
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10500..12548)
DNA (2049bp) protein (683aa)
Putative TRAP-type C4-dicarboxylate transport system, large permease component id=4900377 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Pusillimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
TRAP C4-dicarboxylate transport system permease DctM
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
14_0929_02_30cm_scaffold_35_12
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12572..13279)
DNA (708bp) protein (236aa)
Putative membrane protein id=4900378 bin=GWA2_Methylomirabilis_73_35 species=Sinorhizobium fredii genus=Sinorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
fcbTs1; TRAP-type mannitol/chloroaromatic compound transport system, small permease component
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
14_0929_02_30cm_scaffold_35_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(13375..14517)
DNA (1143bp) protein (381aa)
Putative uncharacterized protein id=4900379 bin=GWA2_Methylomirabilis_73_35 species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_02_30cm_scaffold_35_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(14626..15315)
DNA (690bp) protein (230aa)
protease Do (EC:3.4.21.108) id=14625822 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
degQ; periplasmic trypsin-like serine protease lipoprotein DegQ
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_02_30cm_scaffold_35_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(15312..15950)
DNA (639bp) protein (213aa)
lon3; ATP-dependent protease La; K07157 id=14625820 bin=bin7_NC10_sister species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
lon3; ATP-dependent protease La
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_02_30cm_scaffold_35_16
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(15959..17077)
DNA (1119bp) protein (373aa)
Mrp id=4759406 bin=GWC2_Methylomirabilis_70_16 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
14_0929_02_30cm_scaffold_35_17
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

17357..17851
DNA (495bp) protein (165aa)
flavin reductase domain-containing protein id=14625818 bin=bin7_NC10_sister species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
putative oxidoreductase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_02_30cm_scaffold_35_18
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

17848..18927
DNA (1080bp) protein (360aa)
DegT/DnrJ/EryC1/StrS aminotransferase id=4334275 bin=GWF2_Methylomirabilis_70_14 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
14_0929_02_30cm_scaffold_35_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

18927..20048
DNA (1122bp) protein (374aa)
Glycosyl transferase, group 1 id=4600883 bin=GWA2_Methylomirabilis_73_35 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
group 1 glycosyl transferase
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_02_30cm_scaffold_35_20
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

20045..21793
DNA (1749bp) protein (583aa)
lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA (EC:3.6.3.44)
Lipid A export ATP-binding/permease protein MsbA id=4600885 bin=GWA2_Methylomirabilis_73_35 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_02_30cm_scaffold_35_21
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

21934..23004
DNA (1071bp) protein (357aa)
putative Zn-dependent hydrolase of beta-lactamase fold protein id=14625801 bin=bin7_NC10_sister species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
putative Zn-dependent hydrolase of beta-lactamase fold protein
Tax=CSP1_6_Rokubacteria
14_0929_02_30cm_scaffold_35_22
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

23029..25281
DNA (2253bp) protein (751aa)
MMPL domain protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CHF8_THET1
MMPL domain protein
MMPL domain protein {ECO:0000313|EMBL:ACZ43179.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
14_0929_02_30cm_scaffold_35_23
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25340..25993)
DNA (654bp) protein (218aa)
RhtB family transporter n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003165813
Translocator protein, LysE family {ECO:0000313|EMBL:EFF73386.1}; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii ATCC 43553.;"
RhtB family transporter
14_0929_02_30cm_scaffold_35_24
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(26044..27771)
DNA (1728bp) protein (576aa)
nadE; glutamine-dependent NAD+ synthetase (EC:6.3.5.1); K01950 NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] id=14625812 bin=bin7_NC10_sister species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
NH(3)-dependent NAD(+) synthetase (EC:6.3.1.5)
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
14_0929_02_30cm_scaffold_35_25
unknown

Not on your lists

28019..28585
DNA (567bp) protein (189aa)

This feature has no annotations

14_0929_02_30cm_scaffold_35_26
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28777..29847)
DNA (1071bp) protein (357aa)
Gluconolactonase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WJY9_9BURK
Gluconolactonase {ECO:0000313|EMBL:EHR70961.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
putative gluconolactonase
14_0929_02_30cm_scaffold_35_27
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

30301..30489
DNA (189bp) protein (63aa)
id=4476363 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_02_30cm_scaffold_35_28
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

30444..31028
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TLH6_MESCW
Uncharacterized protein {ECO:0000313|EMBL:AIC16329.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
hypothetical protein
14_0929_02_30cm_scaffold_35_29
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(31204..32232)
DNA (1029bp) protein (343aa)
Possible lysine decarboxylase family id=4476360 bin=GWF2_Methylomirabilis_70_14 species=Leptolyngbya sp. PCC 6406 genus=Leptolyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_02_30cm_scaffold_35_30
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(32248..32919)
DNA (672bp) protein (224aa)
Putative uncharacterized protein id=4554898 bin=GWC2_Methylomirabilis_70_24 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Displaying items 1-30 of 128 in total

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